Chaperonin ID: b18423
Chaperonin Group: I
Deposit Date: 2011-01-16
Type: ref
Type strain?: no
Genus: Helicobacter
Species: pylori
Strain: F16
Lineage: root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Epsilonproteobacteria; Campylobacterales; Helicobacteraceae; Helicobacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: AP011940
Peptide Genbank Accession: BAJ54605
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: -
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAAGAAATCAAATTTTCAGATAGTGCAAGAAACCTTTTATTTGAAGGCGTGAGA
CAACTCCATGACGCTGTCAAAGTAACCATGGGGCCAAGAGGCAGGAATGTGTTGATCCAA
AAAAGCTATGGCGCTCCAAGCATCACCAAAGATGGCGTGAGCGTGGCTAAAGAGATTGAA
TTAAGTTGCCCGGTAGCTAACATGGGCGCTCAACTCGTTAAAGAAGTAGCGAGCAAAACC
GCTGATGCTGCCGGCGATGGCACGACCACAGCGACCGTGCTTGCTTATAGCATTTTTAAA
GAGGGCTTGAGAAACATCACGGCTGGGGCTAACCCTATTGAAGTGAAACGAGGCATGGAT
AAAGCCGCTGAAGCCATTATTAATGAGCTTAAAAAAGCGAGCAAAAAAGTAGGCGGTAAA
GAAGAAATCACCCAAGTAGCGACCATTTCTGCAAACTCTGATCACAATATTGGGAAACTC
ATCGCTGACGCTATGGAAAAAGTGGGTAAAGACGGCGTGATCACCGTTGAAGAAGCTAAG
GGCATTGAAGATGAATTAGATATCGTAGAGGGCATGCAATTTGATAGAGGCTATCTCTCC
CCTTACTTTGTAACAAACGCTGAGAAAATGACCGCTCAATTGGATAACGCTTACATCCTT
TTAACGGATAAAAAAATCTCTAACATGAAAGACATTCTCCCGCTACTAGAAAAAACCATG
AAAGAGGGCAAACCGCTTTTAATCATCGCTGAAGACATTGAGGGCGAAGCTTTAACGACT
CTAGTGGTGAATAAATTAAGAGGCGTGTTGAATATCGCAGCGGTTAAAGCTCCAGGCTTT
GGGGACAGAAGAAAAGAAATGCTCAAAGACATCGCTGTTTTAACCGGCGGTCAAGTCATT
AGCGAAGAATTAGGCTTGACTTTAGAAAACGCTGAAGTGGAGTTTTTAGGCAAAGCCGGA
AGGATTGTGATTGACAAAGACAACACCACGATCGTAGATGGCAAAGGACATAGCCATGAT
GTTAAAGACAGAGTCGTGCAAATCAAAACCCAAATTGCAAGCACGACAAGCGATTATGAC
AAGGAAAAATTGCAAGAAAGATTGGCTAAACTCTCTGGCGGTGTGGCTGTGATTAAAGTG
GGTGCTGCGAGTGAAGTGGAAATGAAAGAGAAAAAAGACCGGGTTGATGACGCATTGAGC
GCGACTAAAGCGGCTGTTGAAGAAGGCATTGTTATTGGCGGCGGTGCGGCTCTCATTCGC
GCGGCTCAAAAAGTGCATTTGAATTTACACGATGATGAAAAAGTGGGCTATGAAATCATC
ATGCGCGCCATTAAAGCCCCATTAGCTCAAATCGCTATCAATGCCGGTTATGATGGCGGT
GTGGTCGTGAATGAAGTGCAAAAACACGAAGGGCATTTTGGTTTTAACGCTAGCAATGGC
AAGTATGTGGATATGTTTAAAGAAGGCATTATTGACCCCTTAAAAGTAGAAAGGATCGCT
TTACAAAATGCGGTTTCGGTTTCAAGCTTACTTTTAACCACAGAAGCCACCGTGCATGAA
ATCAAAGAAGAAAAAGCAACCCCAGCAATGCCTGATATGGGTGGCATGGGTGGTATGGGA
GGCATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKFSDSARNLLFEGVRQLHDAVKVTMGPRGRNVLIQKSYGAPSITKDGVSVAKEIE
LSCPVANMGAQLVKEVASKTADAAGDGTTTATVLAYSIFKEGLRNITAGANPIEVKRGMD
KAAEAIINELKKASKKVGGKEEITQVATISANSDHNIGKLIADAMEKVGKDGVITVEEAK
GIEDELDIVEGMQFDRGYLSPYFVTNAEKMTAQLDNAYILLTDKKISNMKDILPLLEKTM
KEGKPLLIIAEDIEGEALTTLVVNKLRGVLNIAAVKAPGFGDRRKEMLKDIAVLTGGQVI
SEELGLTLENAEVEFLGKAGRIVIDKDNTTIVDGKGHSHDVKDRVVQIKTQIASTTSDYD
KEKLQERLAKLSGGVAVIKVGAASEVEMKEKKDRVDDALSATKAAVEEGIVIGGGAALIR
AAQKVHLNLHDDEKVGYEIIMRAIKAPLAQIAINAGYDGGVVVNEVQKHEGHFGFNASNG
KYVDMFKEGIIDPLKVERIALQNAVSVSSLLLTTEATVHEIKEEKATPAMPDMGGMGGMG
GMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCGACCGTGCTTGCTTATAGCATTTTTAAAGAGGGCTTGAGAAACATCACGGCTGGGGCT
AACCCTATTGAAGTGAAACGAGGCATGGATAAAGCCGCTGAAGCCATTATTAATGAGCTT
AAAAAAGCGAGCAAAAAAGTAGGCGGTAAAGAAGAAATCACCCAAGTAGCGACCATTTCT
GCAAACTCTGATCACAATATTGGGAAACTCATCGCTGACGCTATGGAAAAAGTGGGTAAA
GACGGCGTGATCACCGTTGAAGAAGCTAAGGGCATTGAAGATGAATTAGATATCGTAGAG
GGCATGCAATTTGATAGAGGCTATCTCTCCCCTTACTTTGTAACAAACGCTGAGAAAATG
ACCGCTCAATTGGATAACGCTTACATCCTTTTAACGGATAAAAAAATCTCTAACATGAAA
GACATTCTCCCGCTACTAGAAAAAACCATGAAAGAGGGCAAACCGCTTTTAATCATCGCT
GAAGACATTGAGGGCGAAGCTTTAACGACTCTAGTGGTGAATAAATTAAGAGGCGTGTTG
AATATCGCAGCGGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYSIFKEGLRNITAGANPIEVKRGMDKAAEAIINELKKASKKVGGKEEITQVATIS
ANSDHNIGKLIADAMEKVGKDGVITVEEAKGIEDELDIVEGMQFDRGYLSPYFVTNAEKM
TAQLDNAYILLTDKKISNMKDILPLLEKTMKEGKPLLIIAEDIEGEALTTLVVNKLRGVL
NIAAV