Chaperonin ID: b15977
Chaperonin Group: I
Deposit Date: 2008-11-30
Type: fie
Type strain?: no
Genus: Actinobacteria
Species: sp.
Strain: N153
Lineage: root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae
Original ID: N153_103-6
CUTC ID: -
Nucleotide Genbank Accession: FJ577599
Peptide Genbank Accession: ACV82515
Best FASTA Match: b26707 Gardnerella vaginalis W11 (see fasta results)
Date of FASTA search: 2024-07-22
FASTA identity %: 100.000
Best BLASTP Match: b32847 Gardnerella vaginalis UGent 25.49 LMG 30819 (see blastp results)
Date of BLASTP search: 2024-07-22
BLASTP identity %: 100.000
Source: other
Notes: Vaginal isolate (Nairobi). Sequence represents 2 isolates from vaginal specimens collected as part of a study about HIV resistance in Nairobi commercial sex worker cohort, and a single isolate from Canadian adolescents attending a gynecology clinic, collected preliminary to the Nairobi study. Submitted by J. Schellenberg, University of Manitoba
Full Nucleotide Sequence: -
Full Peptide Sequence: -
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCTACCGTTTTGGCTCAGTCTTTAGTTCACGAAGGCTTAAAGAATGTTGTTGCAGGAAGC
AATCCAATTGCTCTTCGCCGCGGCATTGAAAAAGCTTCCGAAGCAATTGTTAAGGAATTG
CTTGCGTCTGCTAAAGATGTTGAAACAAAGGATCAAATCGCTGCTACTGCTACGATTTCT
GCTGCCGACCCAGAAGTTGGCGAAAAGATTGCAGAAGCTCTAGATAAGGTTGGTCAAGAC
GGCGTTGTTACTGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTTACAGAAGGC
ATGCGCTTTGATAAGGGTTACATTTCTCCTTACTTTGTAACTAACGCAGAAGATCAGACT
GCTGTTTTGGAAGATCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAAGAC
ATTGTTCATGTTGCAGAACTTGTTATGAAGTCTGGTAAGCCATTGCTTATTATTGCGGAA
GATGTTGATGGCGAAGCTTTGCCAACTCTTGTTCTTAACAAGATTCGTGGCACTTTCAAC
ACTGTAGCTGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS
AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT
AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN
TVAV