Chaperonin ID: | b15949 |
Chaperonin Group: | I |
Deposit Date: | 2008-11-30 |
Type: | fie |
Type strain?: | no |
Genus: | Proteobacteria |
Species: | sp. |
Strain: | N98 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria |
Original ID: | N98_87-3 |
CUTC ID: | - |
Nucleotide Genbank Accession: | FJ577632 |
Peptide Genbank Accession: | ACV82547 |
Best FASTA Match: | b22186 Escherichia coli KTE26 (see fasta results) |
Date of FASTA search: | 2024-07-01 |
FASTA identity %: | 100.000 |
Best BLASTP Match: | b35292 Shigella boydii 59-248 (see blastp results) |
Date of BLASTP search: | 2024-07-01 |
BLASTP identity %: | 100.000 |
Source: | other |
Notes: | Vaginal isolate (Nairobi). Sequence represents 2 isolates from vaginal specimens collected as part of a study about HIV resistance in Nairobi commercial sex worker cohort. Submitted by J. Schellenberg, University of Manitoba |
Full Nucleotide Sequence: | - |
Full Peptide Sequence: | - |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCTCAGGCTATCATCACTGAAGGTCTGAAAGCTGTTGCTGCGGGCATG AACCCGATGGACCTGAAACGTGGTATCGACAAAGCTGTTACCGCTGCAGTTGAAGAACTG AAAGCGCTGTCCGTACCGTGCTCTGACTCTAAAGCGATTGCTCAGGTTGGTACCATCTCC GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGACAAAGTCGGTAAA GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA GGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC GCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGC GAAATGCTGCCGGTTCTGGAAGCTGTTGCCAAAGCAGGCAAACCGCTGCTGATCATCGCT GAAGATGTAGAAGGCGAAGCGCTGGCAACTCTGGTTGTTAACACCATGCGTGGCATCGTG AAAGTTGCTGCGGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTIS ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |