Chaperonin ID: b1556
Chaperonin Group: I
Deposit Date: 2002-03-11
Type: ref
Type strain?: no
Genus: Oryza
Species: sativa
Strain: cv. Nipponbare
Lineage: root; cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Liliopsida; commelinids; Poales; Poaceae; BEP clade; Ehrhartoideae; Oryzeae; Oryza
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: AC092263
Peptide Genbank Accession: AAL83689
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: cpn60 alpha
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCCACCATGCCAAGCACTTGCGCCTCCTCCTCCTCCCTCTTCCTCCTCCTCCGCAGG
GACAGGAGGAGCAGCAGGAGTGCCAGCCTCCCCGGACCCGCCCGCCGTTTGGGGGTTGTG
CGCGCCTCCGCCAAGGAGATCGCCTTCGACCAGGGATCGCGATCCTCCCTCCAGGCCGGC
GTCGAGAAGCTCGCCGCCGCCGTCGCCGTCACCCTCGGTCCCAGAGGAAGAAATGTCGTC
TTGGATGAGTTTGGGAGCCCCAAAGTGGTCAATGACGGAGTTACCATTGCTCGAGCTATT
GAGCTCGCTGATCCAATGGAGAATGCCGGTGCTGCTTTGATTCGTGAGGTTGCCAGCAAG
ACAAATGACTCAGCAGGTGATGGGACTACAACCGCATCTGTCCTGGCTCGTGAGATCATA
AAATTGGGCCTGCTGAGTGTTACTTCAGGGGCAAACCCAGTATCTATCAAAAAGGGCATA
GATAAGACCGTGCACAGTTTAGTTGAGGAACTTGAGAAGAAGTCAAGGCCTGTGAAGGGC
AGTGGTGATATTAAAGCTGTTGCTGCCATATCTGCTGGAAATGATGACTTCGTCGGTACC
ATGATCGCTGAGGCTATTGACAAGGTTGGCCCTGATGGTGTTCTTTCGATCGAGTCATCA
TCATCTTTTGAGACCACCGTTGAAGTTGAAGAAGGAATGGAGATTGACAGAGGATATATC
TCTCCTCAGTTTGTTACAAATCCTGAGAAGTCACTTGTTGAGTTTGAAAATGCTAGAATT
CTTGTCACTGACCAGAAGATTTCTTCAATAAAAGAAATAATTCCTTTGCTGGAACAAACA
ACTCAACTAAGAGCACCACTCCTCATAATTGCGGAGGATGTAGCTGGCGAAGCTTTGGCA
ACTTTAGTTGTCAACAAGCTTAGAGGAATTCTCAATGTAGCTGCGATTAAAGCACCTGGC
TTTGGTGAAAGGCGTAAGGCTCTTCTTCAGGACATCGCCATCGTTACAGGTGCTGAATTT
CAAGCCAAAGATCTTGGTTTACTGGTGGAGAGTACAACCGTGGAGCAACTTGGCATAGCC
CGGAAAGTGACAATCTCCCAGTCATCCACTACCATTATAGCAGATGTTGCCACCAAAGAT
GAGATCCAGGCAAGAATTGCACAGCTGAAGAGAGAGCTTTCTCAGACAGACTCAGCATAT
GACTCTGAGAAGTTGGCTGAGAGAATCGCAAAGCTTTCTGGCGGAGTTGCGGTTATAAAG
GTAGGAGCTGCAACCGAGACAGAGCTTGAGGATCGCAAGCTTCGTATCGAGGATGCCAAG
AATGCAACATTTGCTGCTATTGAGGAAGGTATAGTACCTGGAGGTGGTGCGGCCTATGTT
CACCTGTCAAAATTTGTACCAGCCATCAAGGAGAAGTTGGATGACCCTGAAGAGCGCCTT
GGTGCTGATATCATTCAAAAGGCTCTAGTGGCACCGGCAGCACTAATAGCACACAATGCT
GGAGTTGAAGGGGAAGTGATTGTAGAAAAGATCAAGGAGAGTGAATGGGAGGTTGGCTAC
AATGCGATGGCTGACAGACACGAGAACTTGGTACAGGCTGGTGTGATTGACCCTGCAAAG
GTGACAAGATGTGCGTTGCAAAACGCAGCCTCGGTGGCTGGAATGGTACTAACCACGCAA
GCCATCGTTGTGGAGAAGCCAAAGAAGAAGGCGTCGGCGGCTTCCGGGGCACCAGAAGGT
TCTCTTGCCATGTGA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MATMPSTCASSSSLFLLLRRDRRSSRSASLPGPARRLGVVRASAKEIAFDQGSRSSLQAG
VEKLAAAVAVTLGPRGRNVVLDEFGSPKVVNDGVTIARAIELADPMENAGAALIREVASK
TNDSAGDGTTTASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKG
SGDIKAVAAISAGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYI
SPQFVTNPEKSLVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALA
TLVVNKLRGILNVAAIKAPGFGERRKALLQDIAIVTGAEFQAKDLGLLVESTTVEQLGIA
RKVTISQSSTTIIADVATKDEIQARIAQLKRELSQTDSAYDSEKLAERIAKLSGGVAVIK
VGAATETELEDRKLRIEDAKNATFAAIEEGIVPGGGAAYVHLSKFVPAIKEKLDDPEERL
GADIIQKALVAPAALIAHNAGVEGEVIVEKIKESEWEVGYNAMADRHENLVQAGVIDPAK
VTRCALQNAASVAGMVLTTQAIVVEKPKKKASAASGAPEGSLAM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCATCTGTCCTGGCTCGTGAGATCATAAAATTGGGCCTGCTGAGTGTTACTTCAGGGGCA
AACCCAGTATCTATCAAAAAGGGCATAGATAAGACCGTGCACAGTTTAGTTGAGGAACTT
GAGAAGAAGTCAAGGCCTGTGAAGGGCAGTGGTGATATTAAAGCTGTTGCTGCCATATCT
GCTGGAAATGATGACTTCGTCGGTACCATGATCGCTGAGGCTATTGACAAGGTTGGCCCT
GATGGTGTTCTTTCGATCGAGTCATCATCATCTTTTGAGACCACCGTTGAAGTTGAAGAA
GGAATGGAGATTGACAGAGGATATATCTCTCCTCAGTTTGTTACAAATCCTGAGAAGTCA
CTTGTTGAGTTTGAAAATGCTAGAATTCTTGTCACTGACCAGAAGATTTCTTCAATAAAA
GAAATAATTCCTTTGCTGGAACAAACAACTCAACTAAGAGCACCACTCCTCATAATTGCG
GAGGATGTAGCTGGCGAAGCTTTGGCAACTTTAGTTGTCAACAAGCTTAGAGGAATTCTC
AATGTAGCTGCGATT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ASVLAREIIKLGLLSVTSGANPVSIKKGIDKTVHSLVEELEKKSRPVKGSGDIKAVAAIS
AGNDDFVGTMIAEAIDKVGPDGVLSIESSSSFETTVEVEEGMEIDRGYISPQFVTNPEKS
LVEFENARILVTDQKISSIKEIIPLLEQTTQLRAPLLIIAEDVAGEALATLVVNKLRGIL
NVAAI