RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14388 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-07-01 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Allochromatium |
| Species: | vinosum |
| Strain: | D |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Allochromatium |
| Original ID: | DSM 180 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013851 |
| Peptide Genbank Accession: | YP_003442831 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | - |
| Notes: | Type strain synonyms strain D = ATCC 17899 = DSM 180 = NBRC 103801. This sequence is not identical to a previous report (Genbank M99443, cpnDB b118). |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCCAAGCAGATCTTCTTCAGTGAAAACGCCCGTGTCCGCATGTTGCGCGGCGTC GACGTCCTGGCCAATGCGGTCAAGGTCACGCTGGGTCCGAAGGGCCGCAACGTCGTGATC GAGAAGTCCTGGGGCGCGCCGACCGTCACCAAGGACGGCGTCTCGGTCGCCAAGGCGATC GAACTCAAGGACAAGTTCGAGAACATGGGTGCGCAGATGGTGAAAGAGGTCGCCTCCAAG ACCTCCGACATCGCCGGCGACGGCACCACCACCGCGACCGTGCTGGCGCAGGCCATGGTC CGCGAGGGCCTGAAGTCGGTTGCCGCCGGCATGAACCCGATGGACATCAAGCGCGGCATG GATCAGGCCGTCGAGGCCGCGATCAAGGAGCTGCAAGCCCTGTCGCGTCCCTGCTCGACC AACAAGGAGATCGCCCAAGTCGGCACCATCTCGGCCAACTCCGACGACTCGATCGGCAAC ATCATCGCCGAGGCGATGGAGAAGGTCGGCAAGGAAGGCGTCATCACGGTTGAGGAAGGC AAGTCGCTGCACAACGAGCTGGATCTGGTCGAAGGCATGCAGTTCGACCGCGGCTATCTG TCGCCCTACTTCATCAACAACCAGCAGAGCCAGAAGACCGAGCTGGACGATCCCTTCATC CTGCTGTACGACAAGAAGATCTCCAACATCCGTGATCTTCTCCCCGTGCTGGAAGGTGTC GCCAAGGCCGGCAAGCCGCTGCTGATCCTCGCCGAGGACATCGAGGGCGAGGCGCTGGCG ACCCTGGTGGTCAACACCCTGCGCGGCATTCTCAAGGTCTGTGCGGTCAAGGCGCCCGGC TTCGGTGATCGTCGCAAGGCCATGCTCCAGGACATCGCCATCCTGACCGGCGCGACCGTG ATCTCCGAGGAAGTCGGCCTGTCGCTGGAGAAGGCGACCCTGAACGATCTGGGTACCGCC AAGCGCGTCCAGGTCGGCAAGGACGACACCACCATCATCGACGGCGCCGGCTCGCACGAC GACATCAAGGCCCGTTGCGAGCAGATCCGCGCTCAGGTCGAGGAGACCAGCTCCGACTAC GATCGCGAGAAGCTCCAGGAGCGTCTGGCCAAGCTGGCCGGTGGCGTGGCCGTGATCAAG GTCGGCGCGGCCACCGAGATCGAGATGAAGGAAAAGAAGATGCGCGTCGAGGATGCCCTG CACGCGACCCGCGCGGCGGTCGAGGAAGGCATCGTGCCCGGCGGCGGTGTCGCCCTGGTG CGTGCACTCACCGCGATCAAGGATCTGAAGGGCGCGAACGACGACCAGACCGTCGGCATC ACCATCGCCCGGCGTGCGATGGAAGAGCCGCTGCGTCAGATCGTCGCCAACGCGGGTGAA GAGCCGTCTGTCATCCTCAACACGGTCGCCGACGGCTCCGGCAGCTTCGGCTACAACGCC GCCAACGGCGAGTTCGGCGACATGATGGAGATGGGCGTCATCGATCCGACCAAGGTCACG CGCTCGGCGTTGCAGAACGCCTGCTCGGTCGCGGGTCTGATGATCACCACCGAGGCCATG GTCGCCGACGAGCCGAAGAAGGAGAAGGCATCGGCCGCGCCCGCCGGCGGCATGGACGAC ATGGACTACTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQIFFSENARVRMLRGVDVLANAVKVTLGPKGRNVVIEKSWGAPTVTKDGVSVAKAI ELKDKFENMGAQMVKEVASKTSDIAGDGTTTATVLAQAMVREGLKSVAAGMNPMDIKRGM DQAVEAAIKELQALSRPCSTNKEIAQVGTISANSDDSIGNIIAEAMEKVGKEGVITVEEG KSLHNELDLVEGMQFDRGYLSPYFINNQQSQKTELDDPFILLYDKKISNIRDLLPVLEGV AKAGKPLLILAEDIEGEALATLVVNTLRGILKVCAVKAPGFGDRRKAMLQDIAILTGATV ISEEVGLSLEKATLNDLGTAKRVQVGKDDTTIIDGAGSHDDIKARCEQIRAQVEETSSDY DREKLQERLAKLAGGVAVIKVGAATEIEMKEKKMRVEDALHATRAAVEEGIVPGGGVALV RALTAIKDLKGANDDQTVGITIARRAMEEPLRQIVANAGEEPSVILNTVADGSGSFGYNA ANGEFGDMMEMGVIDPTKVTRSALQNACSVAGLMITTEAMVADEPKKEKASAAPAGGMDD MDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTGGCGCAGGCCATGGTCCGCGAGGGCCTGAAGTCGGTTGCCGCCGGCATG AACCCGATGGACATCAAGCGCGGCATGGATCAGGCCGTCGAGGCCGCGATCAAGGAGCTG CAAGCCCTGTCGCGTCCCTGCTCGACCAACAAGGAGATCGCCCAAGTCGGCACCATCTCG GCCAACTCCGACGACTCGATCGGCAACATCATCGCCGAGGCGATGGAGAAGGTCGGCAAG GAAGGCGTCATCACGGTTGAGGAAGGCAAGTCGCTGCACAACGAGCTGGATCTGGTCGAA GGCATGCAGTTCGACCGCGGCTATCTGTCGCCCTACTTCATCAACAACCAGCAGAGCCAG AAGACCGAGCTGGACGATCCCTTCATCCTGCTGTACGACAAGAAGATCTCCAACATCCGT GATCTTCTCCCCGTGCTGGAAGGTGTCGCCAAGGCCGGCAAGCCGCTGCTGATCCTCGCC GAGGACATCGAGGGCGAGGCGCTGGCGACCCTGGTGGTCAACACCCTGCGCGGCATTCTC AAGGTCTGTGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMVREGLKSVAAGMNPMDIKRGMDQAVEAAIKELQALSRPCSTNKEIAQVGTIS ANSDDSIGNIIAEAMEKVGKEGVITVEEGKSLHNELDLVEGMQFDRGYLSPYFINNQQSQ KTELDDPFILLYDKKISNIRDLLPVLEGVAKAGKPLLILAEDIEGEALATLVVNTLRGIL KVCAV |