RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14160 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-06-07 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Eubacterium |
| Species: | rectale |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium |
| Original ID: | ATCC 33656 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_012781 |
| Peptide Genbank Accession: | YP_002938143 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | This strain is a proposed neotype strain for the species (original type strain at ATCC has been lost), but rule of IJSEM (rule 18c) has not been followed. For more information, see LBSN database. ATCC database refers to this strain as type strain. The neotype strain VPI 0990 = ATCC 33656 = CIP 105953 is not an established neotype (see Rule 18c). |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGGAAATTAAATATGGCTCAGAAGCCAGAGCAGCACTTGGAGCTGGAGTAGAT AAATTAGCAAATACAGTCAGAGTAACACTTGGACCAAAAGGAAGAAACGTAGTACTTGAC AAATCATACGGTGCACCACTCATCACAAACGATGGTGTTACAATCGCAAAAGAGGTTGAG CTTGAGGATGCTTTCGAGAACATGGGAGCACAGCTTGTCAAGGAAGTTGCCACAAAGACA AATGATGTAGCAGGAGACGGAACAACAACAGCTACAGTTCTTACACAGGCAATGGTTCAG GAAGGAATGAAGAACCTTGAGGCAGGAGCAAACCCAATCGTGCTTCGTCGTGGTATGAAG AAGGCTACAGACAAAGCTGTTGAGGCACTTAAGGATATGAGCCAGAAAGTAAAAGGCAAA GAGCAGATCGCTAAGGTTGCAGCTATCTCAGCAGGAGATGAGGAAGTTGGTAATCTCGTA GCAGACGCTATGGAAAAGGTTACAAACGATGGTGTTATCACAATTGAAGAGTCAAAGACA ATGCAGACAGAGCTTGACCTTGTAGAAGGTATGCAGTTCGACAGAGGATACCTCTCAGCA TATATGTGCACAGATATGGACAAGATGGAAGCAGTACTTGATGATCCGTATATCCTTATT ACTGACAAGAAGATTTCTAACATCCAGGATATTCTTCCATTACTTGAGAAGATTGTTCAG GCCGGTGCAAGACTTCTTATCATCGCTGAGGATGTTGAGGGCGAGGCTCTTACAACACTT ATCGTTAATAAGCTTCGTGGTACATTCAATGTAGTAGCTGTAAAGGCTCCTGGATATGGT GACAGAAGAAAAGCAATGCTTGAGGATATTGCAATCCTTACAGGTGGTCAGGTGATCAGC TCTGATCTTGGACTTGAGCTCAAGGATACAACAATCGATATGCTTGGCCGTGCTAAGTCA GTTAAGGTTCAGAAGGAGAACACAGTCATCGTTGATGGTGCCGGAGACAAGGATGCTATC GCAGGCAGAGTAAGCCAGATCCGTGGTCAGATTGATGAGACAACATCTGAGTTTGATAAA GAAAAATTACAGGAGCGTCTTGCCAAGATGGCAGGCGGTGTAGCAGTTATCCGTGTAGGT GCTGCAACAGAGACAGAGATGAAAGAGGCAAAGCTTCGTATGGAGGATGCCCTTAACGCT ACAAGAGCAGCAGTTGAAGAGGGAATCATCGCAGGTGGTGGATCAGCATATATCCATGCA TCAAAGAAGGTTGCAGAGCTTGTTGATACACTTGAGGGCGATGAGAAGACAGGTGCAAAG GTTATCCTTAAAGCACTCGAGGCTCCACTTTACTATATCGCTGCAAATGCAGGACTTGAA GGTGCAGTAATCATCAACAAGGTAAAGGAGTCAGCTCCTGGAACCGGCTTCAACGCAGCT ACAGAAGAGTATGTAGATATGGTTGATAACGGAATCCTTGATCCTGTAAAGGTTACAAGA AGTGCATTACAGAATGCAACATCAGTAGCTTCAACACTCCTCACAACAGAGTCAGCAGTA GCTACAATCAAAGAGGACACTCCAGCAATGCCAGCCGGAGCCGGCGCCGGAATGGGCATG ATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKYGSEARAALGAGVDKLANTVRVTLGPKGRNVVLDKSYGAPLITNDGVTIAKEVE LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLTQAMVQEGMKNLEAGANPIVLRRGMK KATDKAVEALKDMSQKVKGKEQIAKVAAISAGDEEVGNLVADAMEKVTNDGVITIEESKT MQTELDLVEGMQFDRGYLSAYMCTDMDKMEAVLDDPYILITDKKISNIQDILPLLEKIVQ AGARLLIIAEDVEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGQVIS SDLGLELKDTTIDMLGRAKSVKVQKENTVIVDGAGDKDAIAGRVSQIRGQIDETTSEFDK EKLQERLAKMAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGIIAGGGSAYIHA SKKVAELVDTLEGDEKTGAKVILKALEAPLYYIAANAGLEGAVIINKVKESAPGTGFNAA TEEYVDMVDNGILDPVKVTRSALQNATSVASTLLTTESAVATIKEDTPAMPAGAGAGMGM M |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTTCTTACACAGGCAATGGTTCAGGAAGGAATGAAGAACCTTGAGGCAGGAGCA AACCCAATCGTGCTTCGTCGTGGTATGAAGAAGGCTACAGACAAAGCTGTTGAGGCACTT AAGGATATGAGCCAGAAAGTAAAAGGCAAAGAGCAGATCGCTAAGGTTGCAGCTATCTCA GCAGGAGATGAGGAAGTTGGTAATCTCGTAGCAGACGCTATGGAAAAGGTTACAAACGAT GGTGTTATCACAATTGAAGAGTCAAAGACAATGCAGACAGAGCTTGACCTTGTAGAAGGT ATGCAGTTCGACAGAGGATACCTCTCAGCATATATGTGCACAGATATGGACAAGATGGAA GCAGTACTTGATGATCCGTATATCCTTATTACTGACAAGAAGATTTCTAACATCCAGGAT ATTCTTCCATTACTTGAGAAGATTGTTCAGGCCGGTGCAAGACTTCTTATCATCGCTGAG GATGTTGAGGGCGAGGCTCTTACAACACTTATCGTTAATAAGCTTCGTGGTACATTCAAT GTAGTAGCTGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLTQAMVQEGMKNLEAGANPIVLRRGMKKATDKAVEALKDMSQKVKGKEQIAKVAAIS AGDEEVGNLVADAMEKVTNDGVITIEESKTMQTELDLVEGMQFDRGYLSAYMCTDMDKME AVLDDPYILITDKKISNIQDILPLLEKIVQAGARLLIIAEDVEGEALTTLIVNKLRGTFN VVAV |