Chaperonin ID: b14088
Chaperonin Group: I
Deposit Date: 2009-05-24
Type: ref
Type strain?: yes
Genus: Planctomyces
Species: limnophilus
Strain: -
Lineage: root; cellular organisms; Bacteria; Planctomycetes; Planctomycetacia; Planctomycetales; Planctomycetaceae; Planctomyces
Original ID: DSM 3776
CUTC ID: -
Nucleotide Genbank Accession: CP001744
Peptide Genbank Accession: ADG68748
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms strain MŸ 290 = ATCC 43296 = DSM 3776 = IFAM 1008.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		GTGGCTAAACAACTGCTGTTTGAAGATCTCGCCCGGGTTAAGCTGCAGCGCGGCGTGGAC
ACCCTTGCCCAGGCTGTTGCGGTTACCATGGGGCCGACAGGTCGCAATGTCATCATCGAC
AAGAGCTTTGGTAACCCTGTGGTGACCAAGGACGGTGTGACTGTCAGTAAGGAAGTCGAG
CTGGAAGACCCCTTCGAGAACATGGGTGCCAAGCTGGTCAACGAAGTGGCTTCCAAGACC
AGTGATATCGCTGGCGATGGAACGACCACGGCCACTGTGCTGGCCCGTGCGATTTACTCT
CAAGGTCTGCGCAGCCTCTCGCTGGGTGCAAACCCAACGGTCGTGCGTAAGGGGATTGAA
AAGGCTGTCGATGCTGCCATCAAGGCCATCGAAGAGCTGGCCAAGCCTGTCGCCACCAAG
CAGGAAATCTCCCAGGTGGGAGCAATTTCTGCCAATAACGATAAGGCCATCGGTGATCTC
ATTGCCGACGCCATGGAGAAGGTGGGACGCGATGGTGTGATCACTGTCGAAGAAGGTAAA
GGGAACAACATTACTCTCGATCTTGCCGAGGGGATGCAGTTCGACAAGGGTTACATTTCG
CCTTACTTCGTCACCAGTGCCGAAGAGATGAAGGTGATTCTTGAGAACGCTTATGTTCTC
TTCTACGAAAAGAAGATTTCCAGCCTGCGGGAATTCGTGCCTCTGCTGGAGAAGGTCGCC
CAGACCGGACGGCCACTGCTGGTTGTGGCTGAAGATGTGGATGGCGAAGCGTTGACTGCC
CTGGTGGTCAATAAGCTCCGCGGGATCCTGCAGATTGCGGCTGTCAAGGCTCCTGGCTTT
GGCGATCGTCGTAAGGCCATGCTGGGTGATATGGCTGTTCTCACGGGTGGCACGCTCATT
TCCGAAGACCTCGGGATCAAGCTCGAAACCGTTGAACTGGGTCATCTGGGTCAGGTCAAG
CGGGTTGAAGTCGATAAAGACAAGACCACTCTCATCGACGGTGCCGGCGATGCCGAAGCG
ATCAAGACTCGTGTCGATCAGATCCGCAAGCAGATCGAACAGACCGATAGCGAATACGAT
CGCGAGAAGTTCCAGGAGCGATTGGCGAAGCTCACCGGTGGTGTAGCGATCATCTCCGTC
GGTGCGACGACTGAAGCTGAGATGAAGCAGACCAAGGCTCGTCTCGAAGATGCCCTGCAT
GCGACTCGCGCTGCTGTCGAAGAAGGGATTCTCCCCGGCGGTGGTGTTGCACTTCTGCGA
GCGATTGAAGCTGTCAGCGAAGTGAAGGCTAAAGGCGACGAAAAGATTGGTGTCGAGATT
GTCACCAAGGCACTCGAAGCCCCGATTCGCCAGATTGTCACCAACTGCGGTCTCGATGGA
GCTGTCGTGGCTGATGAAGTGCGCAGCTTGGGCAAGAACCACGGCTTCAATGCCCAGACT
GGCGAATATGTCGATATGTACAAGGCCGGGATTGTTGATCCAGCCAAGGTGGTAAAGAGC
GCATTGCGATTTGCTTCTTCGATTGCCGGTCTGATGCTCACCACTCAGGTTCTCGTGACC
AAGGGGAACGAACCTGGTGAGAAGAAGAAAGCCATCGAAGGGGCTGTTCACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKQLLFEDLARVKLQRGVDTLAQAVAVTMGPTGRNVIIDKSFGNPVVTKDGVTVSKEVE
LEDPFENMGAKLVNEVASKTSDIAGDGTTTATVLARAIYSQGLRSLSLGANPTVVRKGIE
KAVDAAIKAIEELAKPVATKQEISQVGAISANNDKAIGDLIADAMEKVGRDGVITVEEGK
GNNITLDLAEGMQFDKGYISPYFVTSAEEMKVILENAYVLFYEKKISSLREFVPLLEKVA
QTGRPLLVVAEDVDGEALTALVVNKLRGILQIAAVKAPGFGDRRKAMLGDMAVLTGGTLI
SEDLGIKLETVELGHLGQVKRVEVDKDKTTLIDGAGDAEAIKTRVDQIRKQIEQTDSEYD
REKFQERLAKLTGGVAIISVGATTEAEMKQTKARLEDALHATRAAVEEGILPGGGVALLR
AIEAVSEVKAKGDEKIGVEIVTKALEAPIRQIVTNCGLDGAVVADEVRSLGKNHGFNAQT
GEYVDMYKAGIVDPAKVVKSALRFASSIAGLMLTTQVLVTKGNEPGEKKKAIEGAVH
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACTGTGCTGGCCCGTGCGATTTACTCTCAAGGTCTGCGCAGCCTCTCGCTGGGTGCA
AACCCAACGGTCGTGCGTAAGGGGATTGAAAAGGCTGTCGATGCTGCCATCAAGGCCATC
GAAGAGCTGGCCAAGCCTGTCGCCACCAAGCAGGAAATCTCCCAGGTGGGAGCAATTTCT
GCCAATAACGATAAGGCCATCGGTGATCTCATTGCCGACGCCATGGAGAAGGTGGGACGC
GATGGTGTGATCACTGTCGAAGAAGGTAAAGGGAACAACATTACTCTCGATCTTGCCGAG
GGGATGCAGTTCGACAAGGGTTACATTTCGCCTTACTTCGTCACCAGTGCCGAAGAGATG
AAGGTGATTCTTGAGAACGCTTATGTTCTCTTCTACGAAAAGAAGATTTCCAGCCTGCGG
GAATTCGTGCCTCTGCTGGAGAAGGTCGCCCAGACCGGACGGCCACTGCTGGTTGTGGCT
GAAGATGTGGATGGCGAAGCGTTGACTGCCCTGGTGGTCAATAAGCTCCGCGGGATCCTG
CAGATTGCGGCTGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLARAIYSQGLRSLSLGANPTVVRKGIEKAVDAAIKAIEELAKPVATKQEISQVGAIS
ANNDKAIGDLIADAMEKVGRDGVITVEEGKGNNITLDLAEGMQFDKGYISPYFVTSAEEM
KVILENAYVLFYEKKISSLREFVPLLEKVAQTGRPLLVVAEDVDGEALTALVVNKLRGIL
QIAAV