Chaperonin ID: b13606
Chaperonin Group: I
Deposit Date: 2009-04-27
Type: ref
Type strain?: yes
Genus: Lancefieldella
Species: parvula
Strain: -
Lineage: root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Lancefieldella; Lancefieldella parvula
Original ID: DSM 20469
CUTC ID: -
Nucleotide Genbank Accession: NC_013203
Peptide Genbank Accession: YP_003179211
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms strain IPP 1246 = ATCC 33793 = CCUG 32760 = CIP 102970 = DSM 20469 = JCM 10300 = VPI 0546. Formerly Atopobium parvula.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCTAAAGATATCGATTTTGGCACCGACGCTCGTGCCAAGCTTGCTAAGGGCGTAAAC
ACCCTGGCAGATGCCGTAACCACCACCCTTGGACCTAAGGGTCGCTACGTTGCACTGCAG
CGTTCTTATGGTGCACCAACTATTACCAACGACGGCGTTTCCGTTGCTCGCGAGATTGAG
CTTAAGGACCCAGTAGAGAACATGGGTGCACAGCTGGTCAAAGAGGTTGCAACCAAGACT
AACGATACTGTCGGTGATGGTACCACCACCGCAACCTTGCTTGCACAGGTTATTGTTAAC
GAGGGTCTTCGTAATGTTGCAGCTGGTGCAAATCCAATTGCAATTCGCCGCGGCATCGAC
AAGGCTGTTGAGGCTGTTGTCTCCCAGATGAAGGGTATTGCTAAGGAGGTCTCAACCAAG
CAGCAGATTGCTTCCGTTGGTACCATTTCTGCAGGTGACCCTGTCATTGGTGGCAAGATT
TCAGATGCTATGGACGTTGTCGGCAAGGATGGCGTCATTACTGTTGAGGAGTCTCAGACC
TTTGGTATTGACATCGACACCGTTGAGGGTATGCAGTTTGACAAGGGCTATGTTTCCCCT
TACTTCGCAACCAACAACGAGACTCTCACCGCTGAGCTGGACAATCCTTACATTCTGATG
ACCGATAGCAAGATCTCCTCCATCCAGGACATCCTGCCTATCCTTGAGGCTGTCCAGAAG
CAGGGCGCACCTCTGCTCATCATGGCTGAGGACGTTGACGGCGAGGCTTTGACCACCCTC
ATCCTTAACAAGCTTCGTGGCGTTCTGAACGTCTGCGCAATTAAGGCTCCTGCATACGGC
GACCGTCGTAAGCGTATGCTTGAGGACATTGCTGTTCTCACTGGTGGTCAGGCAGTCATC
AAGGAGCTCGGTGTTAACCTCAATGAGATTACCGCTGACATGCTCGGCCGCGCTAAGTCC
GTCAAGGTTACCAAGGAGACCACTACCATCGTTGGTGGCGCTGGTTCCAAGGACGCAATT
GACGAGCGTATTGCTCAGATTAAGGCTGAGATTGACAACACCACTTCTGACTTTGATCGC
GAGAAGCTCCAGGAGCGTCTTGCTAAGCTTGCTGGCGGCGTTGCCGTTATCAAGGTTGGT
GCAGCTACTGAGGTTGAGCTCAAGGAGATTAAGCACCGCATCGAGGACGCACTTCAGGCA
ACTCGCGCAGCTGTCGAGGAGGGTATTGTTGCAGGCGGCGGCGTTTCCTTCCTGGCTGCA
TCTTCTGTTTTGGATAGCGTTCAGACCTCTGATGCAGACGAGAAGATTGGTGTTGAAATC
ATCCGTAAGGCACTTGAGGCTCCAGTTCGCACCATCGCTAACAATGCTGGTTTCGAGGGC
AGCGTAGTTGTCGAGAAGATCAAGGCACTCCCAGCAGGTCAGGGTCTTGATTCTGCAACA
GGTCAGTATGGCGACATGATTGAGATGGGCGTTCTTGACCCAGTTAAGGTCACCCGCACC
ACGCTTCAGAATGCAGCTTCCGTTGCATCCCTCATCCTCATCACTGAGGCAACTGTTTCC
GAGATGCCAAAGGACACCACCATCGAGGAGTCCATTTCTCGTGCAGCTGCTCAGGGCGGC
CAGGGCGGCATGTACTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKDIDFGTDARAKLAKGVNTLADAVTTTLGPKGRYVALQRSYGAPTITNDGVSVAREIE
LKDPVENMGAQLVKEVATKTNDTVGDGTTTATLLAQVIVNEGLRNVAAGANPIAIRRGID
KAVEAVVSQMKGIAKEVSTKQQIASVGTISAGDPVIGGKISDAMDVVGKDGVITVEESQT
FGIDIDTVEGMQFDKGYVSPYFATNNETLTAELDNPYILMTDSKISSIQDILPILEAVQK
QGAPLLIMAEDVDGEALTTLILNKLRGVLNVCAIKAPAYGDRRKRMLEDIAVLTGGQAVI
KELGVNLNEITADMLGRAKSVKVTKETTTIVGGAGSKDAIDERIAQIKAEIDNTTSDFDR
EKLQERLAKLAGGVAVIKVGAATEVELKEIKHRIEDALQATRAAVEEGIVAGGGVSFLAA
SSVLDSVQTSDADEKIGVEIIRKALEAPVRTIANNAGFEGSVVVEKIKALPAGQGLDSAT
GQYGDMIEMGVLDPVKVTRTTLQNAASVASLILITEATVSEMPKDTTIEESISRAAAQGG
QGGMY
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCAACCTTGCTTGCACAGGTTATTGTTAACGAGGGTCTTCGTAATGTTGCAGCTGGTGCA
AATCCAATTGCAATTCGCCGCGGCATCGACAAGGCTGTTGAGGCTGTTGTCTCCCAGATG
AAGGGTATTGCTAAGGAGGTCTCAACCAAGCAGCAGATTGCTTCCGTTGGTACCATTTCT
GCAGGTGACCCTGTCATTGGTGGCAAGATTTCAGATGCTATGGACGTTGTCGGCAAGGAT
GGCGTCATTACTGTTGAGGAGTCTCAGACCTTTGGTATTGACATCGACACCGTTGAGGGT
ATGCAGTTTGACAAGGGCTATGTTTCCCCTTACTTCGCAACCAACAACGAGACTCTCACC
GCTGAGCTGGACAATCCTTACATTCTGATGACCGATAGCAAGATCTCCTCCATCCAGGAC
ATCCTGCCTATCCTTGAGGCTGTCCAGAAGCAGGGCGCACCTCTGCTCATCATGGCTGAG
GACGTTGACGGCGAGGCTTTGACCACCCTCATCCTTAACAAGCTTCGTGGCGTTCTGAAC
GTCTGCGCAATT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATLLAQVIVNEGLRNVAAGANPIAIRRGIDKAVEAVVSQMKGIAKEVSTKQQIASVGTIS
AGDPVIGGKISDAMDVVGKDGVITVEESQTFGIDIDTVEGMQFDKGYVSPYFATNNETLT
AELDNPYILMTDSKISSIQDILPILEAVQKQGAPLLIMAEDVDGEALTTLILNKLRGVLN
VCAI