Chaperonin ID: b13588
Chaperonin Group: I
Deposit Date: 2009-04-25
Type: cli
Type strain?: no
Genus: Laribacter
Species: hongkongensis
Strain: HLHK9
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Laribacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: CP001154
Peptide Genbank Accession: ACO74861
Best FASTA Match: b33056 Microvirgula sp. AG722 (see fasta results)
Date of FASTA search: 2024-07-22
FASTA identity %: 86.900
Best BLASTP Match: b28118 Aquaspirillum serpens DSM 68 (see blastp results)
Date of BLASTP search: 2024-07-22
BLASTP identity %: 88.172
Source: Genbank
Notes: HLHK9 was isolated from a case of gastroenteritis in Hong Kong and will be used for comparative analysis.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAGCAAAAGACGTCAAGTTTGGTGATTCCGCCCGTTCCAAGATGGTTGACGGGGTA
AACATTCTGGCTGATGCCGTCAAGGTCACCCTTGGCCCGAAAGGCCGCAATGTCGTGCTG
GAGCGCAGCTACGGCGCTCCGACCATCACCAAGGATGGTGTGTCCGTTGCCAAGGAAATC
ACCCTGAAGGACAAGTTCGAGAACATGGGCGCCCAGATGGTCAAGGAAGTGGCTTCCAAG
ACCAACGACGTCGCTGGTGACGGCACCACCACCGCTACTGTGCTGGCCCAGGCCATCATG
CAGGAAGGCATGAAGTACGTCGCCGCCGGCATGAACCCGATCGACCTCAAGCGCGGCATC
GACAAGGCCGTCGTGGCGCTGGTGGCTGAAATCAAGAACATCGCCAAGCCGTGCGCCACC
ACCAAGGAAATCGCCCAGGTCGGCGCCATTTCCGCCAACAGCGACACCGTGATCGGTGAC
AAGATCGCTGCGGCCATGGAAAAGGTCGGCAAGGAAGGCGTGATCACTGTTGAAGACGGT
TCAGGCCTGGAAGACGAGCTGGAAGTGGTCGAAGGCATGCAGTTCGACCGTGGCTACCTC
AGCCCGTACTTCATCAACCAGCCGGAAAAGCAGATCGCCCAGCTCGACAATCCGTTCATC
CTGCTGTGTGACAAGAAAATCACCAACATCCGCGAACTGTTGCCGGTTCTGGAACAAGTC
TCCAAGGCTGGCCGCCCGTTGCTGGTGATTGCTGCCGAAGATGTGGAAGGCGAAGCGCTG
GCCACGCTGGTGGTCAACAACATGCGCGGTATCCTCAAGACCGTGGCCGTCAAGGCTCCG
GGCTTCGGCGATCGGCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACCGGCGGCACC
GTAATCAGCGAGGAAATCGGTCTGCCGCTGGAAAAGGCCACTATTGACATGCTGGGCCAG
GCCAAGCGCATCGAGGTCAGCAAGGACACCACCACCATCATTGATGGCGTGGGCACTGCC
GAAGCCATCAAGGCCCGTGTCGAACAGATCCGCGCTCACATCGAAACGGCCAGCAGCGAC
TACGACCGCGAAAAGATGCAGGAACGTCTGGCCAAGCTGGCCGGTGGTGTGGCCGTGATC
AAGGTCGGTGCTGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGCGTCGAAGACGCC
CTGCACGCAACCCGCGCTGCCGTGGAAGAAGGCATCGTGGCCGGTGGCGGTGTGGCCCTG
CTGCGCGCCCGTGCCAACCTGAAGGAAGTGGCCACCATCAACGCCGAGCAGGCAGCCGGT
GTGCAGATCGTGATGCGCGCGATCGAATCGCCGCTGCGCCAGATCGTGGCCAACGCCGGT
GACGAGCCGAGCGTGGTGGTCAACAAGGTGTACGAAGGCAGCGGCAACTTCGGTTACAAC
GCTGCAACCGGTGAGTACGGCGACCTGGTGGAAATGGGCGTGCTCGACCCGGCCAAGGTG
ACCCGTTCGGCCCTGCAACACGCTGCTTCGGTGGCTGGCCTGATGCTGACCACTGATTGC
ATGGTGGCCGAGCTGCCGGAAGACAAGCCTGCCATGCCGGCCGGCGGAATGGGCGGCATG
GGTGGAATGGGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAAKDVKFGDSARSKMVDGVNILADAVKVTLGPKGRNVVLERSYGAPTITKDGVSVAKEI
TLKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIMQEGMKYVAAGMNPIDLKRGI
DKAVVALVAEIKNIAKPCATTKEIAQVGAISANSDTVIGDKIAAAMEKVGKEGVITVEDG
SGLEDELEVVEGMQFDRGYLSPYFINQPEKQIAQLDNPFILLCDKKITNIRELLPVLEQV
SKAGRPLLVIAAEDVEGEALATLVVNNMRGILKTVAVKAPGFGDRRKAMLEDIAILTGGT
VISEEIGLPLEKATIDMLGQAKRIEVSKDTTTIIDGVGTAEAIKARVEQIRAHIETASSD
YDREKMQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVAL
LRARANLKEVATINAEQAAGVQIVMRAIESPLRQIVANAGDEPSVVVNKVYEGSGNFGYN
AATGEYGDLVEMGVLDPAKVTRSALQHAASVAGLMLTTDCMVAELPEDKPAMPAGGMGGM
GGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCTACTGTGCTGGCCCAGGCCATCATGCAGGAAGGCATGAAGTACGTCGCCGCCGGCATG
AACCCGATCGACCTCAAGCGCGGCATCGACAAGGCCGTCGTGGCGCTGGTGGCTGAAATC
AAGAACATCGCCAAGCCGTGCGCCACCACCAAGGAAATCGCCCAGGTCGGCGCCATTTCC
GCCAACAGCGACACCGTGATCGGTGACAAGATCGCTGCGGCCATGGAAAAGGTCGGCAAG
GAAGGCGTGATCACTGTTGAAGACGGTTCAGGCCTGGAAGACGAGCTGGAAGTGGTCGAA
GGCATGCAGTTCGACCGTGGCTACCTCAGCCCGTACTTCATCAACCAGCCGGAAAAGCAG
ATCGCCCAGCTCGACAATCCGTTCATCCTGCTGTGTGACAAGAAAATCACCAACATCCGC
GAACTGTTGCCGGTTCTGGAACAAGTCTCCAAGGCTGGCCGCCCGTTGCTGGTGATTGCT
GCCGAAGATGTGGAAGGCGAAGCGCTGGCCACGCTGGTGGTCAACAACATGCGCGGTATC
CTCAAGACCGTGGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQAIMQEGMKYVAAGMNPIDLKRGIDKAVVALVAEIKNIAKPCATTKEIAQVGAIS
ANSDTVIGDKIAAAMEKVGKEGVITVEDGSGLEDELEVVEGMQFDRGYLSPYFINQPEKQ
IAQLDNPFILLCDKKITNIRELLPVLEQVSKAGRPLLVIAAEDVEGEALATLVVNNMRGI
LKTVAV