Chaperonin ID: b13587
Chaperonin Group: I
Deposit Date: 2009-04-25
Type: cli
Type strain?: no
Genus: Laribacter
Species: hongkongensis
Strain: HLHK9
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Laribacter
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: CP001154
Peptide Genbank Accession: ACO73653
Best FASTA Match: b33056 Microvirgula sp. AG722 (see fasta results)
Date of FASTA search: 2024-07-22
FASTA identity %: 90.100
Best BLASTP Match: b28118 Aquaspirillum serpens DSM 68 (see blastp results)
Date of BLASTP search: 2024-07-22
BLASTP identity %: 94.054
Source: Genbank
Notes: HLHK9 was isolated from a case of gastroenteritis in Hong Kong and will be used for comparative analysis.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCTGCTAAAGACGTCAAATTTGGTGATTCCGCCCGTTCCAAGATGGTGGTGGGTGTC
AATATCCTGGCCGATGCCGTCAAGACCACGCTCGGCCCGAAAGGCCGCAACGTCGTGCTG
GAACGCAGCTACGGCGCTCCGACCATCACCAAGGACGGCGTGTCCGTTGCCAAGGAAATC
GAACTGAAGGACAAGTTCGAGAACATGGGCGCCCAGATGGTCAAGGAAGTGGCTTCCAAG
ACCAACGACGTCGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCATCGTG
CAGGAAGGCATGAAGTACGTCGCTGCCGGCATGAACCCGATGGACCTCAAGCGCGGCATC
GACAAGGCCGTCGTGGCACTGGTCGAAGAAATCAAGAACATCGCCAAGCCGTGCGCCACC
ACCAAGGAAATCGCCCAGGTCGGCGCCATCTCCGCCAACAGCGACACCGTGATCGGTGAA
AAGATCGCTGCGGCCATGGAAAAGGTCGGCAAGGAAGGCGTGATTACCGTTGAAGACGGT
TCGGGTCTGGAAGACGAACTCGACGTCGTCGAAGGCATGCAGTTCGACCGCGGCTACCTC
AGCCCGTACTTCATCAACCAGCCGGAAAAGCAGATCGCCCAGCTCGACAATCCGTACGTG
CTGCTGTGCGACAAGAAGATCAGCAACATCCGCGAACTGCTGCCGACCCTGGAGCAAGTC
GCCAAGTCCGGCCGTCCGCTGCTGATCATCGCTGAAGACGTGGAAGGCGAAGCACTGGCC
ACGCTGGTGGTCAACAACATGCGCGGCATCCTCAAGACCGTGGCCGTCAAGGCTCCGGGC
TTCGGCGACCGTCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACCGGCGGCACCGTG
ATTGCCGAAGAAGTCGGCCTGACGCTGGAAAAGGTGTCACTCGAGATGCTGGGTCAGGCC
AAGCGTGTTGAAGTGGCCAAGGAAAACACCACCCTCATCGACGGCGCCGGTTCCGAAGCC
GCCATCAAGGCCCGTGTCGAACAGATCCGTGCCCTGATCGAAACCGCAACCAGCGACTAC
GACCGCGAAAAGATGCAGGAACGTCTGGCCAAGCTGGCCGGTGGTGTGGCCGTGATCAAG
GTCGGTGCTGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCCCGCGTCGAAGACGCCCTG
CACGCAACCCGCGCTGCCGTGGAAGAAGGCATCGTGGCCGGTGGCGGCGTGGCCCTGCTG
CGCGCCCGTGCCAACCTGAAGGAAGTGGCCACCATCAACGCCGAGCAGGCAGCCGGTGTG
CAGATCGTGATGCGCGCGATCGAATCGCCGCTGCGCCAGATCGTGGCCAACGCCGGTGAT
GAGCCGAGCGTGGTGGTCAACAAGGTGTACGAAGGCAGCGGCAACTTCGGTTACAACGCT
GCAACCGGCGAATACGGCGACCTGGTGGAAATGGGCGTGCTCGACCCGGCCAAGGTGACC
CGTTCGGCCCTGCAACACGCTGCTTCGGTGGCTGGCCTGATGCTGACCACCGACTGCATG
GTGGCCGAGCTGCCGGAAGACAAGCCGGCTGCTCCGGACATGGGCGGCATGGGTGGCATG
GGCGGCATGATGTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAAKDVKFGDSARSKMVVGVNILADAVKTTLGPKGRNVVLERSYGAPTITKDGVSVAKEI
ELKDKFENMGAQMVKEVASKTNDVAGDGTTTATVLAQAIVQEGMKYVAAGMNPMDLKRGI
DKAVVALVEEIKNIAKPCATTKEIAQVGAISANSDTVIGEKIAAAMEKVGKEGVITVEDG
SGLEDELDVVEGMQFDRGYLSPYFINQPEKQIAQLDNPYVLLCDKKISNIRELLPTLEQV
AKSGRPLLIIAEDVEGEALATLVVNNMRGILKTVAVKAPGFGDRRKAMLEDIAILTGGTV
IAEEVGLTLEKVSLEMLGQAKRVEVAKENTTLIDGAGSEAAIKARVEQIRALIETATSDY
DREKMQERLAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL
RARANLKEVATINAEQAAGVQIVMRAIESPLRQIVANAGDEPSVVVNKVYEGSGNFGYNA
ATGEYGDLVEMGVLDPAKVTRSALQHAASVAGLMLTTDCMVAELPEDKPAAPDMGGMGGM
GGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACCGTGCTGGCCCAGGCCATCGTGCAGGAAGGCATGAAGTACGTCGCTGCCGGCATG
AACCCGATGGACCTCAAGCGCGGCATCGACAAGGCCGTCGTGGCACTGGTCGAAGAAATC
AAGAACATCGCCAAGCCGTGCGCCACCACCAAGGAAATCGCCCAGGTCGGCGCCATCTCC
GCCAACAGCGACACCGTGATCGGTGAAAAGATCGCTGCGGCCATGGAAAAGGTCGGCAAG
GAAGGCGTGATTACCGTTGAAGACGGTTCGGGTCTGGAAGACGAACTCGACGTCGTCGAA
GGCATGCAGTTCGACCGCGGCTACCTCAGCCCGTACTTCATCAACCAGCCGGAAAAGCAG
ATCGCCCAGCTCGACAATCCGTACGTGCTGCTGTGCGACAAGAAGATCAGCAACATCCGC
GAACTGCTGCCGACCCTGGAGCAAGTCGCCAAGTCCGGCCGTCCGCTGCTGATCATCGCT
GAAGACGTGGAAGGCGAAGCACTGGCCACGCTGGTGGTCAACAACATGCGCGGCATCCTC
AAGACCGTGGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQAIVQEGMKYVAAGMNPMDLKRGIDKAVVALVEEIKNIAKPCATTKEIAQVGAIS
ANSDTVIGEKIAAAMEKVGKEGVITVEDGSGLEDELDVVEGMQFDRGYLSPYFINQPEKQ
IAQLDNPYVLLCDKKISNIRELLPTLEQVAKSGRPLLIIAEDVEGEALATLVVNNMRGIL
KTVAV