RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b13492 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-03-06 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Phocaeicola |
| Species: | coprophilus |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola coprophilus |
| Original ID: | DSM 18228 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_BBIJ01000024 |
| Peptide Genbank Accession: | WP_008143442 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms: strain CB42 = DSM 18228 = JCM 13818. Reclassified from Bacteroides coprophilus |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGATATTCTCTTCAATATGGACGCGCGTGACCTGTTGAAAAAAGGTGTAGAT GAATTGGCTAACGCAGTGAAAGTAACTCTGGGCCCGAAAGGCCGTAACGTGATCATCGAA AAGAAATTCGGTGCTCCTCACATTACAAAGGATGGTGTAACTGTTGCTAAAGAAGTGGAA TTGAGCGATCCGTTCCAGAACACAGGTGCACAGCTTGTGAAGTCTGTTGCTTCAAAGACT GGTGACGATGCCGGTGATGGTACAACTACTGCAACTGTTCTGGCTCAGGCTATTGTAGGC GTAGGTTTGAAGAATGTAACTGCCGGTGCAAACCCGATGGATCTGAAACGCGGTATCGAT AAAGCAGTTGCCAAGGTTGTTGAATCTATCAAGTCGCAGGCTGAAACTGTAGGCGATAAC TATGATAAGATTGAACAGGTTGCAACAATTTCTGCGAACAATGATCCGGTGATCGGTAAA CTGATTGCAGATGCAATGCGCAAGGTTTCCAAGGACGGTGTGATCACTATCGAAGAAGCT AAAGGTACAGATACTACTATCGGTGTAGTAGAAGGTATGCAGTTCGACCGTGGTTACTTG TCAGCTTACTTTGTAACAGATACAGAGAAGATGGAATGCGTGATGGAACATCCGTATATC CTGATCTATGACAAGAAGATTTCTAACCTGAAAGATTTCCTGCCTATTCTGGAACCGGCT GTACAGAGCGGACGTCCTTTGCTGGTTATCGCAGAAGATGTGGACAGCGAAGCTTTGACT ACTCTGGTTGTAAACCGTCTGCGTGGTCAGTTGAAGATCTGTGCAGTGAAAGCTCCGGGC TTCGGCGACCGTCGTAAAGCTATGCTGGAAGATATTGCCGTATTGACAGGTGGTGTTGTA ATCAGCGAAGAAAAAGGCTTGAAACTGGAACAGGCTACACTGGAAATGCTGGGTACTTGC GATAAAGTAACTGTATCTAAGGAAAATACAACCATTGTAAACGGTGCCGGTCAGAAAGAA CTGATTCAGGAACGTATCAACCAGATCAAGGCTGAGATGAAGAATTCTACTTCTGATTAT GACAAGGAAAAACTGCAGGAACGTCTGGCTAAGCTGTCAGGTGGTGTAGCAGTTCTGTAC GTAGGTGCAGCCAGCGAAGTAGAAATGAAAGAAAAGAAAGACCGTGTTGACGATGCATTG TGCGCTACCCGTGCAGCTATCGAAGAAGGTATCGTTCCGGGCGGTGGTGTAACTTACATC CGTGCCATCGATGCTTTGGAAGGTATGAAGGGTGACAACGCTGATGAAACAACTGGTATC GAAATCATCAAACGTGCTATCGAAGAGCCGTTGCGTCAGATTGTAGCCAACGCTGGTAAA GAAGGCGCAGTAGTTGTTCAGAAAGTACGTGAAGGCAAGGGCGACTTCGGTTACAATGCA CGTACCGATGTTTACGAACACTTGCATGCAGCTGGTGTGGTAGATCCTGCCAAAGTTACT CGTGTTGCATTAGAAAACGCAGCTTCTATCGCAGGTATGTTCCTGACAACCGAATGTGTT ATCGTAGAGAAGAAAGAAGATAAGCCTGAAATGCCGATGGCTGCTCCGGGAATGGGCGGT ATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDILFNMDARDLLKKGVDELANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEVE LSDPFQNTGAQLVKSVASKTGDDAGDGTTTATVLAQAIVGVGLKNVTAGANPMDLKRGID KAVAKVVESIKSQAETVGDNYDKIEQVATISANNDPVIGKLIADAMRKVSKDGVITIEEA KGTDTTIGVVEGMQFDRGYLSAYFVTDTEKMECVMEHPYILIYDKKISNLKDFLPILEPA VQSGRPLLVIAEDVDSEALTTLVVNRLRGQLKICAVKAPGFGDRRKAMLEDIAVLTGGVV ISEEKGLKLEQATLEMLGTCDKVTVSKENTTIVNGAGQKELIQERINQIKAEMKNSTSDY DKEKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVTYI RAIDALEGMKGDNADETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGDFGYNA RTDVYEHLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMAAPGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTCTGGCTCAGGCTATTGTAGGCGTAGGTTTGAAGAATGTAACTGCCGGTGCA AACCCGATGGATCTGAAACGCGGTATCGATAAAGCAGTTGCCAAGGTTGTTGAATCTATC AAGTCGCAGGCTGAAACTGTAGGCGATAACTATGATAAGATTGAACAGGTTGCAACAATT TCTGCGAACAATGATCCGGTGATCGGTAAACTGATTGCAGATGCAATGCGCAAGGTTTCC AAGGACGGTGTGATCACTATCGAAGAAGCTAAAGGTACAGATACTACTATCGGTGTAGTA GAAGGTATGCAGTTCGACCGTGGTTACTTGTCAGCTTACTTTGTAACAGATACAGAGAAG ATGGAATGCGTGATGGAACATCCGTATATCCTGATCTATGACAAGAAGATTTCTAACCTG AAAGATTTCCTGCCTATTCTGGAACCGGCTGTACAGAGCGGACGTCCTTTGCTGGTTATC GCAGAAGATGTGGACAGCGAAGCTTTGACTACTCTGGTTGTAAACCGTCTGCGTGGTCAG TTGAAGATCTGTGCAGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVGVGLKNVTAGANPMDLKRGIDKAVAKVVESIKSQAETVGDNYDKIEQVATI SANNDPVIGKLIADAMRKVSKDGVITIEEAKGTDTTIGVVEGMQFDRGYLSAYFVTDTEK MECVMEHPYILIYDKKISNLKDFLPILEPAVQSGRPLLVIAEDVDSEALTTLVVNRLRGQ LKICAV |