Chaperonin ID: b12844
Chaperonin Group: I
Deposit Date: 2009-01-18
Type: fie
Type strain?: no
Genus: Stenotrophomonas
Species: sp.
Strain: SKA14
Lineage: root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas
Original ID: -
CUTC ID: -
Nucleotide Genbank Accession: DS999412
Peptide Genbank Accession: EED37061
Best FASTA Match: b24317 Stenotrophomonas maltophilia SKK35 (see fasta results)
Date of FASTA search: 2024-07-22
FASTA identity %: 99.100
Best BLASTP Match: b30315 Stenotrophomonas sp. CC120222-04 (see blastp results)
Date of BLASTP search: 2024-07-22
BLASTP identity %: 100.000
Source: Genbank
Notes: This strain was collected from the Baltic Sea near Skagerrak (57.57N, 10.44E) at a depth of 4 m.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCTGCCAAGGATATTCGTTTCGGTGAAGACGCCCGTTCGCGCATGGTGCGCGGCGTC
AACGTTCTCGCCAATGCCGTCAAGGCCACCCTGGGCCCGAAGGGCCGCAACGTCGTGCTG
GAAAAGAGCTTCGGCGCTCCGACCATCACCAAGGACGGCGTCTCCGTCGCCAAGGAAATC
GAACTGGCTGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAGGAAGTTGCTTCGCGC
ACCAACGACGACGCGGGCGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCCTGATC
CGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATGAACCCGATGGACCTCAAGCGTGGTATC
GACAAGGCCGTCGTGGCCGCCGTTGCCGAGCTGAAGAACATCTCCAAGCCGACCGCCGAC
GACAAGGCGATCGCCCAGGTCGGTACCATCTCGGCCAACTCGGACGAGTCGATCGGCCAG
ATCATCGCTGACGCGATGAAGGAAGTCGGCAAGGAAGGCGTGATCACCGTTGAAGAAGGC
TCGGGCCTGGACAACGAGCTGGACGTGGTCAAGGGCATGCAGTTCGACCGCGGCTACCTG
TCCCCGTACTTCATCAACAACCAGCAGTCGCAGACCGCTGACCTGGATGACCCGTTCATC
CTGCTGCACGACAAGAAGATCTCCAACGTGCGTGACCTGCTGCCGGTGCTGGAAGGCGTC
GCCAAGGCCGGCAAGCCGCTGCTGATCGTTGCCGAAGAAGTCGAAGGCGAAGCGCTGGCG
ACCCTGGTGGTCAACACCATCCGTGGCATCGTCAAGGTCGTGGCCGTCAAGGCTCCGGGC
TTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATGGCCGTGCTGACCGGCGGCACCGTG
ATCTCCGAAGAAGTGGGCCTGTCGCTGGAAAAGGCCACCATCAAGGACCTGGGCCGCGCC
AAGAAGGTGCAGGTTTCCAAGGAAAACACCACCATCATCGATGGCGTGGGTGACAAGGCT
GCCGTCGACGCACGCGTCGGCCAGATCAAGACCCAGATCCAGGACACCTCCTCCGACTAC
GATCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTTGCCGTGATCAAG
GTCGGTGCCTCGACCGAAATCGAAATGAAGGAAAAGAAGGATCGCGTCGACGACGCCCTG
CACGCCACCCGTGCAGCCGTTGAAGAAGGCGTGGTCCCGGGCGGCGGCGTTGCCCTGGTC
CGTGCGGTCACCTCGCTGGCTGGCCTGAAGGGCGCCAACGAAGACCAGAACCACGGCATC
CAGATCGCCCTGCGTGCGATGGAAGCCCCGCTGCGCGAAATCGTCGCCAACGCCGGTGAA
GAACCGTCGGTCATCATCAACAAGGTCAAGGAAGGCACTGGCAGCTTCGGCTACAACGCC
GCCACCGGCGAGTTCGGCGACATGCTGCAGTTCGGCATCCTGGACCCGACCAAGGTGACC
CGTTCGGCGCTGCAGAACGCTGCCTCGATCGCTGGCCTGATGATCACCACCGAAGCCATG
GTTGCCGAAGCTCCGAAGAAGGACGAGCCGGCCATGGGTGGCGCCGGTGGCATGGGCGGC
ATGGGTGGCATGGGCGGCATGGACTTCTAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI
ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI
DKAVVAAVAELKNISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG
SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV
AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV
ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDARVGQIKTQIQDTSSDY
DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV
RAVTSLAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIINKVKEGTGSFGYNA
ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG
MGGMGGMDF
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCCACCGTGCTGGCCCAGGCCCTGATCCGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATG
AACCCGATGGACCTCAAGCGTGGTATCGACAAGGCCGTCGTGGCCGCCGTTGCCGAGCTG
AAGAACATCTCCAAGCCGACCGCCGACGACAAGGCGATCGCCCAGGTCGGTACCATCTCG
GCCAACTCGGACGAGTCGATCGGCCAGATCATCGCTGACGCGATGAAGGAAGTCGGCAAG
GAAGGCGTGATCACCGTTGAAGAAGGCTCGGGCCTGGACAACGAGCTGGACGTGGTCAAG
GGCATGCAGTTCGACCGCGGCTACCTGTCCCCGTACTTCATCAACAACCAGCAGTCGCAG
ACCGCTGACCTGGATGACCCGTTCATCCTGCTGCACGACAAGAAGATCTCCAACGTGCGT
GACCTGCTGCCGGTGCTGGAAGGCGTCGCCAAGGCCGGCAAGCCGCTGCTGATCGTTGCC
GAAGAAGTCGAAGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGTGGCATCGTC
AAGGTCGTGGCCGTC
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQALIREGAKAVAAGMNPMDLKRGIDKAVVAAVAELKNISKPTADDKAIAQVGTIS
ANSDESIGQIIADAMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQ
TADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIV
KVVAV