Chaperonin ID: b12769
Chaperonin Group: I
Deposit Date: 2008-12-21
Type: ref
Type strain?: yes
Genus: [Bacteroides]
Species: pectinophilus
Strain: -
Lineage: root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; unclassified Clostridiales; [Bacteroides] pectinophilus
Original ID: ATCC 43243
CUTC ID: -
Nucleotide Genbank Accession: NZ_ABVQ01000035
Peptide Genbank Accession: ZP_03462070
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms ATCC 43243, N3. Both the cpn60 and 16S rRNA sequence from the whole genome suggest this organism is a Firmicute.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAAAGGAAATTAAGTACGGAGCAGATGCCAGATCAGCAATGGAAGCAGGCGTTAAC
AAGCTTGCCAATACAGTAAGGGTAACACTTGGACCTAAGGGTCGTAATGTAGTTCTTGAC
AAGTCATATGGTGCACCGCTTATCACTAATGATGGTGTTACAATTGCCAAGGAGATAGAA
CTCGAAGATAAGTTTGAGAATATGGGCGCACAGCTTGTTAAGGAAGTTGCAACAAAGACT
AATGATGCAGCAGGTGATGGTACTACAACAGCAACAGTACTTGCACAGGCAATGGTTAAT
GCCGGTATGAAGAACCTTGCAGCAGGTGCTAATCCAATCATCTTAAGAAAAGGCATGAAG
AAGGCTACTGATTGTGCAGTTGAGGCTATTGCACATATGAGCGAGAAGGTTACAGGCAAG
GATCAGATTGCAAAGGTTGCATCAATCTCAGCAGGTGACGAAGAAGTAGGCCAGATGGTA
GCAGATGCAATGGAGAAGGTTTCTAACGATGGTGTTATCACAATCGAGGAATCTAAGACA
ATGAAGACAGAGCTTGACCTTGTAGAAGGTATGCAGTTTGACAGAGGTTATATCTCAGCA
TACATGGCAACAGATATGGATAAGATGGAAGCTGTCCTTGACAATCCATACATCCTTATC
ACAGATAAGAAGATTTCTAACATTCAGGAGATTCTTCCAATACTTGAGCAGATTGTACAG
AGTGGTTCAAAGCTCCTTATTATTGCAGAGGATGTCGAGGGCGAAGCTCTTACAACACTT
ATTGTTAATAAGTTAAGAGGAACATTTAATGTTGTAGCTGTTAAGGCTCCGGGATATGGC
GACAGAAGAAAAGAGATGCTTAAGGATATCGCCATTCTTACAGGTGGTCAGGTAGTCTCA
GAAGAACTCGGACTTGAGCTTAAGGATACAACAATGGATATGCTCGGCAGAGCTAAGTCT
GTTAAGGTTCAGAAAGAGAACACAGTTATCGTTGACGGTGAAGGCAACAAGGCTGATATC
GATGCAAGAGTTGCACAGATTAAGGCTCAGATAGAAGAGACAACATCAGACTTTGATAAG
GAAAAGCTTCAGGAAAGACTTGCAAAGCTTGCAGGCGGCGTAGCTGTTATCAGAGTAGGT
GCTGCTACTGAGACAGAGATGAAGGAAGCTAAGCTTCGTATGGAAGATGCCCTTAATGCT
ACAAGAGCAGCAGTTGAGGAAGGCGTTATCTCAGGTGGTGGTTCAGCATATATCCACGCA
TCTAAGGAAGTTGCAAAGCTTGCTGCTTCACTTGCAGGAGATGAGAAGACAGGTGCTGAG
ATTATTCTTAAGGCACTTGAAGCTCCACTGTTCCACATTGCTAACAATGCAGGACTTGAA
GGCGCTGTTATTATCAACAACGTAAGAGAGTCTGAGGTTGGTACAGGATATGATGCTCTT
AATGAGAAGTATGTGAACATGGTTGAGGCTGGTATCCTTGACCCTGCTAAGGTTACAAGA
AGTGCTCTTCAGAATGCTACAAGTGTTGCATCTACACTTCTTACAACTGAAGCTGCTGTT
GGAACAATCAAGGAAGACGCTCCGGCAATGCCAGCAGGTGCAGGCATGGGTGGAATGATG
TAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAKEIKYGADARSAMEAGVNKLANTVRVTLGPKGRNVVLDKSYGAPLITNDGVTIAKEIE
LEDKFENMGAQLVKEVATKTNDAAGDGTTTATVLAQAMVNAGMKNLAAGANPIILRKGMK
KATDCAVEAIAHMSEKVTGKDQIAKVASISAGDEEVGQMVADAMEKVSNDGVITIEESKT
MKTELDLVEGMQFDRGYISAYMATDMDKMEAVLDNPYILITDKKISNIQEILPILEQIVQ
SGSKLLIIAEDVEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKEMLKDIAILTGGQVVS
EELGLELKDTTMDMLGRAKSVKVQKENTVIVDGEGNKADIDARVAQIKAQIEETTSDFDK
EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGVISGGGSAYIHA
SKEVAKLAASLAGDEKTGAEIILKALEAPLFHIANNAGLEGAVIINNVRESEVGTGYDAL
NEKYVNMVEAGILDPAKVTRSALQNATSVASTLLTTEAAVGTIKEDAPAMPAGAGMGGMM
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCAACAGTACTTGCACAGGCAATGGTTAATGCCGGTATGAAGAACCTTGCAGCAGGTGCT
AATCCAATCATCTTAAGAAAAGGCATGAAGAAGGCTACTGATTGTGCAGTTGAGGCTATT
GCACATATGAGCGAGAAGGTTACAGGCAAGGATCAGATTGCAAAGGTTGCATCAATCTCA
GCAGGTGACGAAGAAGTAGGCCAGATGGTAGCAGATGCAATGGAGAAGGTTTCTAACGAT
GGTGTTATCACAATCGAGGAATCTAAGACAATGAAGACAGAGCTTGACCTTGTAGAAGGT
ATGCAGTTTGACAGAGGTTATATCTCAGCATACATGGCAACAGATATGGATAAGATGGAA
GCTGTCCTTGACAATCCATACATCCTTATCACAGATAAGAAGATTTCTAACATTCAGGAG
ATTCTTCCAATACTTGAGCAGATTGTACAGAGTGGTTCAAAGCTCCTTATTATTGCAGAG
GATGTCGAGGGCGAAGCTCTTACAACACTTATTGTTAATAAGTTAAGAGGAACATTTAAT
GTTGTAGCTGTT
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAQAMVNAGMKNLAAGANPIILRKGMKKATDCAVEAIAHMSEKVTGKDQIAKVASIS
AGDEEVGQMVADAMEKVSNDGVITIEESKTMKTELDLVEGMQFDRGYISAYMATDMDKME
AVLDNPYILITDKKISNIQEILPILEQIVQSGSKLLIIAEDVEGEALTTLIVNKLRGTFN
VVAV