RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12749 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-12-15 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Thermosipho |
| Species: | africanus |
| Strain: | TCF52B |
| Lineage: | root; cellular organisms; Bacteria; Thermotogae; Thermotogae (class); Thermotogales; Thermotogaceae; Thermosipho |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_011653 |
| Peptide Genbank Accession: | YP_002334111 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | This organism was isolated from the Troll oil formation in the North Sea. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATGTTAAAATTCAGTGAAGAGGCAAGAAGAGCACTTGAAAGAGGTGTTGAT GCAGTTGCAGATGCAGTTAAAATTACATTAGGTCCAAAAGGAAGAAACGTAGTTATTGAA AAATCTTGGGGAAGTCCAACAATTACAAATGACGGTGTTTCAATTGCTAAGGAAATTGAA CTTGAAGATAAATTTGAAAATCTTGGTGCACAACTTGTTAAGGAAGTTGCAAGTAAAACA AATGATGTAGCAGGTGATGGAACAACAACAGCAACAGTTCTTGCACAAGCAATGATAAAA GAAGGAATTAAAAACGTAACAGCTGGTGCAAATCCAATCCTTGTAAAAAGGGGAATTGAA AAAGCAGTTGCAGCAGGTGTCGAAGAAATTAAGAAAATTTCAAAGAAACTTTCAAGTACA AACGATATTGCACATGTAGCATCTATCAGTGCAAACAGTGAAGAAATTGGAAAATTAATT GCAGAAGCAATGGAAAAAGTTGGAGAAGATGGAGTAATTACTGTAGAAGACAGCAAATCA ATTGAGACATATGTTGAATTTACCGAGGGTATGCAATTTGATAGAGGATATGTTTCCCCT TACTTTGTAACTGATCCTGAAAAAATGGAAGTAGTTTACAATGAACCATTTATCCTCATT ACCGATAGGAAACTTTCAAATATAAAACCACTTATTCCAATTCTTGAAAAAGTAGCACAA ACTGGAAAACCACTTGTAATTATTGCTGAAGATGTTGAAGGTGAAGCATTAACAACACTT GTTCTTAACAAACTAAAAGGAACACTTAATACAGTAGCAGTTAAAGCACCTGGATTTGGT GACAGAAGAAAAGCTATGCTCCAAGATATTGCAATTCTTACCGGTGGTATAGTAGCAAGC GAAGAAGTAGGAATTAACTTGGAAGACTTGACATTAAACGATCTAGGAAGAGCAGATGTT GTAAGAGTTAAAAAAGACGAAACAATAATTGTTGGCGGACATGGAGACCAAGAAGAAATT AAAAAGAGAATTGCTCAAATTAAAGCACAAATTGAACAAACTACATCGGAATACGAAAAA GAAACATTACAAGAAAGAATGGCAAAACTTGCTGGTGGTGTCGCAGTAATAAAAGTTGGT GCTGCAACAGAAACCGAATTAAAAGAAAAGAAACACAGAATCGAAGACGCTCTCAGTGCT ACAAGAGCAGCTGTTGAAGAAGGTATTGTTCCAGGTGGAGGAATTACATTACTTCGCGCA AGAAAAGCAGTTGAAAAAGTTGTAAATGAACTTGATGGTGATGAAAAGATTGGTGCAAAG ATTGTTTACGAAGCGTTGATAGCTCCAATTAACCAAATAGCAAAGAACGCAGGTTATGAT GGTGCAATTATTATCCACAAAGTACTTGAAAATGATGATCCAGCATACGGATTTGATGCA TTAAAAGGTGAATACTGTAACATGTTTGAACGCGGAATTATTGACCCAGCAAAAGTTACA AGAAGTGCACTTCAAAACGCAGCATCAATTGCAAGCATGTTGTTAACAACAGAAGCACTT GTAGTTGAAAAACCAGAACCAAAGAATAACGCACCAATGCCAGAAATGCCAGAATATTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKMLKFSEEARRALERGVDAVADAVKITLGPKGRNVVIEKSWGSPTITNDGVSIAKEIE LEDKFENLGAQLVKEVASKTNDVAGDGTTTATVLAQAMIKEGIKNVTAGANPILVKRGIE KAVAAGVEEIKKISKKLSSTNDIAHVASISANSEEIGKLIAEAMEKVGEDGVITVEDSKS IETYVEFTEGMQFDRGYVSPYFVTDPEKMEVVYNEPFILITDRKLSNIKPLIPILEKVAQ TGKPLVIIAEDVEGEALTTLVLNKLKGTLNTVAVKAPGFGDRRKAMLQDIAILTGGIVAS EEVGINLEDLTLNDLGRADVVRVKKDETIIVGGHGDQEEIKKRIAQIKAQIEQTTSEYEK ETLQERMAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGIVPGGGITLLRA RKAVEKVVNELDGDEKIGAKIVYEALIAPINQIAKNAGYDGAIIIHKVLENDDPAYGFDA LKGEYCNMFERGIIDPAKVTRSALQNAASIASMLLTTEALVVEKPEPKNNAPMPEMPEY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACAGTTCTTGCACAAGCAATGATAAAAGAAGGAATTAAAAACGTAACAGCTGGTGCA AATCCAATCCTTGTAAAAAGGGGAATTGAAAAAGCAGTTGCAGCAGGTGTCGAAGAAATT AAGAAAATTTCAAAGAAACTTTCAAGTACAAACGATATTGCACATGTAGCATCTATCAGT GCAAACAGTGAAGAAATTGGAAAATTAATTGCAGAAGCAATGGAAAAAGTTGGAGAAGAT GGAGTAATTACTGTAGAAGACAGCAAATCAATTGAGACATATGTTGAATTTACCGAGGGT ATGCAATTTGATAGAGGATATGTTTCCCCTTACTTTGTAACTGATCCTGAAAAAATGGAA GTAGTTTACAATGAACCATTTATCCTCATTACCGATAGGAAACTTTCAAATATAAAACCA CTTATTCCAATTCTTGAAAAAGTAGCACAAACTGGAAAACCACTTGTAATTATTGCTGAA GATGTTGAAGGTGAAGCATTAACAACACTTGTTCTTAACAAACTAAAAGGAACACTTAAT ACAGTAGCAGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMIKEGIKNVTAGANPILVKRGIEKAVAAGVEEIKKISKKLSSTNDIAHVASIS ANSEEIGKLIAEAMEKVGEDGVITVEDSKSIETYVEFTEGMQFDRGYVSPYFVTDPEKME VVYNEPFILITDRKLSNIKPLIPILEKVAQTGKPLVIIAEDVEGEALTTLVLNKLKGTLN TVAV |