Chaperonin ID: | b12593 |
Chaperonin Group: | I |
Deposit Date: | 2008-10-05 |
Type: | ref |
Type strain?: | no |
Genus: | Aliivibrio |
Species: | salmonicida |
Strain: | LFI1238 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | FM178379 |
Peptide Genbank Accession: | CAQ77702 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Formerly Vibrio salmonicida. From complete sequence of chromosome 1. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAAGACGTTAAATTTGGTAATGACGCACGAATCAAAATGCTAGAAGGTGTA AATGTTCTGGCTGATGCGGTTAAAGTAACTTTGGGTCCTAAGGGTCGTAACGTTGTTTTA GATAAATCATTTGGCGCACCAACGATCACTAAAGATGGTGTTTCTGTTGCACGTGAAATC GAACTTGAAGATAAGTTCCAAAACATGGGCGCACAAATGGTTAAAGAAGTGGCTTCGCAA GCGAATGACGCGGCGGGCGACGGAACAACAACGGCAACCGTTCTTGCTCAAGCTATCATT GCTGAAGGCCTAAAAGCCGTTGCTGCGGGTATGAACCCAATGGATCTTAAACGTGGTATC GACAAAGCAGTTATTGCTGCTGTTGAAGCACTTAAAGATCTATCTGTTCCATGTGCTGAT ACAAAAGCGATCGCGCAAGTAGGTACTATCTCTGCAAACTCTGATTATACTGTTGGTAAT CTTATTGCTGAAGCAATGGAAAAAGTAGGTCGTGACGGTGTTATCACTGTTGAAGAAGGC CAATCTCTTCAAGACGAATTAGACGTTGTTGAAGGTATGCAGTTTGATCGCGGTTACCTA TCTCCATATTTCGTAAACAACCAAGAAGCCGGTTCTGTTGATCTAGACAGCCCATTCATC TTGCTTGTTGATAAAAAAGTATCAAACATCCGTGAATTGCTTCCAACTCTAGAAGCAGTA GCGAAAGCATCTCGTCCTCTTCTTATCATCGCTGAAGATATTGAAGGCGAAGCGCTTGCT ACTCTAGTTGTGAACAACATGCGTGGTATCGTTAAAGTTGCAGCGGTTAAAGCACCTGGT TTTGGTGACCGTCGTAAAGCAATGTTACAAGATATCGCGGCATTAACTGCGGGCTCTGTA ATTTCAGAAGAGATCGGTTTAGAACTTGAAAAAGTAGTTCTTGAAGATCTTGGTCAAGCG AAGCGTGTAACTATTACAAAAGAAACAACAACTATCATCGATGGTGCTGGTGATGAGACT ATTATCTCTGGCCGTGTTTCTCAAATTCGTCAACAAATCGAAGATGCAACCTCTGACTAC GATAAAGAAAAACTTCAAGAGCGTGTAGCTAAATTGGCTGGCGGTGTTGCAGTGATCAAA GTGGGTGCGGCGACTGAAGTTGAGATGAAAGAGAAGAAAGACCGTGTTGAAGATGCACTT CACGCGACTCGCGCAGCCGTTGAAGAAGGTGTTGTTGCTGGTGGTGGTGTTGCACTTATC CGTGCTGCGTCTAAAGTTGTTAACCTTGAAGGTGACAATGAAGAGCAAACTGTGGGTATT CGTTTAGCACTTCGTGCTATGGAAGCACCACTTCGTCAAATCGTTAAAAACGCAGGTGAA GAAGATTCAGTTGTTGCTAACAACGTTCGCGCTGGTGAAGATAACTACGGTTACAACGCA GCTACTGGCGTTTACGGCGACATGATCGAAATGGGTATTCTTGACCCAACTAAAGTAACG CGTTCTGCACTTCAGTTCGCAGCATCGGTTGCGGGTCTTATGATCACAACAGAAGCGATG ATCACTGATAAGCCACAAGATTCAAGTTCTTCTATGCCAGATATGGGCGGCATGGGCGGC ATGGGCGGCATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIIAEGLKAVAAGMNPMDLKRGI DKAVIAAVEALKDLSVPCADTKAIAQVGTISANSDYTVGNLIAEAMEKVGRDGVITVEEG QSLQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLDSPFILLVDKKVSNIRELLPTLEAV AKASRPLLIIAEDIEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAALTAGSV ISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGAGDETIISGRVSQIRQQIEDATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI RAASKVVNLEGDNEEQTVGIRLALRAMEAPLRQIVKNAGEEDSVVANNVRAGEDNYGYNA ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITDKPQDSSSSMPDMGGMGG MGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTTCTTGCTCAAGCTATCATTGCTGAAGGCCTAAAAGCCGTTGCTGCGGGTATG AACCCAATGGATCTTAAACGTGGTATCGACAAAGCAGTTATTGCTGCTGTTGAAGCACTT AAAGATCTATCTGTTCCATGTGCTGATACAAAAGCGATCGCGCAAGTAGGTACTATCTCT GCAAACTCTGATTATACTGTTGGTAATCTTATTGCTGAAGCAATGGAAAAAGTAGGTCGT GACGGTGTTATCACTGTTGAAGAAGGCCAATCTCTTCAAGACGAATTAGACGTTGTTGAA GGTATGCAGTTTGATCGCGGTTACCTATCTCCATATTTCGTAAACAACCAAGAAGCCGGT TCTGTTGATCTAGACAGCCCATTCATCTTGCTTGTTGATAAAAAAGTATCAAACATCCGT GAATTGCTTCCAACTCTAGAAGCAGTAGCGAAAGCATCTCGTCCTCTTCTTATCATCGCT GAAGATATTGAAGGCGAAGCGCTTGCTACTCTAGTTGTGAACAACATGCGTGGTATCGTT AAAGTTGCAGCGGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIIAEGLKAVAAGMNPMDLKRGIDKAVIAAVEALKDLSVPCADTKAIAQVGTIS ANSDYTVGNLIAEAMEKVGRDGVITVEEGQSLQDELDVVEGMQFDRGYLSPYFVNNQEAG SVDLDSPFILLVDKKVSNIRELLPTLEAVAKASRPLLIIAEDIEGEALATLVVNNMRGIV KVAAV |