Chaperonin ID: b12586
Chaperonin Group: I
Deposit Date: 2008-09-28
Type: ref
Type strain?: yes
Genus: Thermodesulfovibrio
Species: yellowstonii
Strain: -
Lineage: root; cellular organisms; Bacteria; Nitrospirae; Nitrospira (class); Nitrospirales; Nitrospiraceae; Thermodesulfovibrio
Original ID: DSM 11347
CUTC ID: -
Nucleotide Genbank Accession: NC_011296
Peptide Genbank Accession: YP_002248448
Best FASTA Match: -
Date of FASTA search: -
FASTA identity %: -
Best BLASTP Match: -
Date of BLASTP search: -
BLASTP identity %: -
Source: Genbank
Notes: Type strain synonyms strain YP87 = ATCC 51303 = DSM 11347.
Full Nucleotide Sequence:
BLAST this sequence:
cpnDB | 		ATGGCAGCAAAGCAGTTAATATTTGGTGATGCAGCAAGACAGTCTATTCTTAAAGGTGTT
ACACTCCTTACTGATGCTGTAAAAGCAACATTGGGACCAAGAGGAAGAAATGTAGTAATT
GAGAGAAAATTCGGTTCTCCCAATGTAACAAAAGACGGTGTCACAGTTGCAAAAGAGATA
GACCTTAAAGAGCCCTTTGAAAACATGGGAGCTCAGCTTGTTCGTGAAGTTGCTTCAAAA
ACATCTGATGTTGCTGGTGACGGAACAACAACAGCAACAGTATTAGCCTATGCTATTTAC
AAAGAAGGTCTTAAATATGTTTCAGCTGGTGCCAATTCAATGGACCTCAAAAGAGGAATT
GACAAAGCAGTTGAAGCAGTTGTTGAGGAACTTAAAAAAATCTCAAAGCCTGTTGTAGAT
AAAAAAGAAATTGCTCAGGTTGGAACTATCTCTGCAAACAATGATGTTTCCATAGGTGAG
TTGATTGCTGAAGCAATGGACAAGGTTGGGAAAGACGGTGTTATAACTGTTGAAGAAGCA
AAGGGAATGGCTACAACCCTTGATATAGTAGAAGGAATGCAATTTGACAGAGGATATATT
TCACCTTATTTCATTACTGATCCAGAAAGACTTGAGTGTATTCTTGAAGATGCTTTTGTT
TTAATCCATGATAAAAAAATATCAACTATGAAGGACTTACTCCCAATTCTTGAGCAGATT
GCAAGAATGGGTAGACCGCTTCTCATTATTGCAGAAGATGTTGAAGGTGAAGCACTTGCA
ACATTGGTTGTAAACAAACTCAGAGGAGTACTTCAGGTTTGTGCTGTAAAAGCACCAGGA
TTTGGAGAAAGAAGAAAAGCAATGCTTGAAGACATAGCTATTCTGACTGGTGGAACAGTT
ATTTCTGAGGACATAGGCCTCAAACTTGAGAATGTCAAAGTTGAAGACCTCGGCAAAGCA
AAGAAAATAATTATTGACAAAGATAACACAACAATTGTTGAAGGGGCTGGTGATCCACAA
AAGATTCAGGCAAGAATCAAGCAGATAAAGGTTCAGATAGATGAAACTACTTCAGATTAT
GACCGCGAAAAACTTCAGGAAAGACTTGCAAAACTTGCAGGCGGAGTTGCAAGAATAAAT
GTTGGTGCAGCCACTGAAGCGGAAATGAAAGAAAAGAAAGCAAGAGTAGAAGATGCATTA
AACGCGACAAGAGCTGCTGTTGAAGAAGGAATTGTTCCTGGTGGTGGAGTAGCGCTTCTG
AGATGTCAAAAAGCATTAGAAAAAATAAAATTTGAAAATCATGACCAACAACTTGGAGCT
GAGATAGTTAAAAAAGCTCTTGAGGAACCAATAAAGCAGATTATAGCAAATGCAGGAGTT
GAAGCTACCCTGATTGTTGAGAAAGTCAAAGAGAATAAGAATATCAATTATGGATATGAT
GCTTATGCAGAAAAGTTTGTTGATATGATGGAGGCTGGAATTATAGACCCAACAAAAGTT
ACAAGAACAGCTCTCCAGAATGCTGCTTCTGTGGCAGGCTTAATGCTTACAACAGAGGTT
CTTGTAGCTGAAATTCCTGAAGAGGAAAAGAAACCTCCAATGCCATCACCTGATATGTAT
TAA
Full Peptide Sequence:
BLAST this sequence:
cpnDB | 		MAAKQLIFGDAARQSILKGVTLLTDAVKATLGPRGRNVVIERKFGSPNVTKDGVTVAKEI
DLKEPFENMGAQLVREVASKTSDVAGDGTTTATVLAYAIYKEGLKYVSAGANSMDLKRGI
DKAVEAVVEELKKISKPVVDKKEIAQVGTISANNDVSIGELIAEAMDKVGKDGVITVEEA
KGMATTLDIVEGMQFDRGYISPYFITDPERLECILEDAFVLIHDKKISTMKDLLPILEQI
ARMGRPLLIIAEDVEGEALATLVVNKLRGVLQVCAVKAPGFGERRKAMLEDIAILTGGTV
ISEDIGLKLENVKVEDLGKAKKIIIDKDNTTIVEGAGDPQKIQARIKQIKVQIDETTSDY
DREKLQERLAKLAGGVARINVGAATEAEMKEKKARVEDALNATRAAVEEGIVPGGGVALL
RCQKALEKIKFENHDQQLGAEIVKKALEEPIKQIIANAGVEATLIVEKVKENKNINYGYD
AYAEKFVDMMEAGIIDPTKVTRTALQNAASVAGLMLTTEVLVAEIPEEEKKPPMPSPDMY
Nucleotide UT Sequence:
BLAST this sequence:
cpnDB | 		GCAACAGTATTAGCCTATGCTATTTACAAAGAAGGTCTTAAATATGTTTCAGCTGGTGCC
AATTCAATGGACCTCAAAAGAGGAATTGACAAAGCAGTTGAAGCAGTTGTTGAGGAACTT
AAAAAAATCTCAAAGCCTGTTGTAGATAAAAAAGAAATTGCTCAGGTTGGAACTATCTCT
GCAAACAATGATGTTTCCATAGGTGAGTTGATTGCTGAAGCAATGGACAAGGTTGGGAAA
GACGGTGTTATAACTGTTGAAGAAGCAAAGGGAATGGCTACAACCCTTGATATAGTAGAA
GGAATGCAATTTGACAGAGGATATATTTCACCTTATTTCATTACTGATCCAGAAAGACTT
GAGTGTATTCTTGAAGATGCTTTTGTTTTAATCCATGATAAAAAAATATCAACTATGAAG
GACTTACTCCCAATTCTTGAGCAGATTGCAAGAATGGGTAGACCGCTTCTCATTATTGCA
GAAGATGTTGAAGGTGAAGCACTTGCAACATTGGTTGTAAACAAACTCAGAGGAGTACTT
CAGGTTTGTGCTGTA
Peptide UT Sequence:
BLAST this sequence:
cpnDB | 		ATVLAYAIYKEGLKYVSAGANSMDLKRGIDKAVEAVVEELKKISKPVVDKKEIAQVGTIS
ANNDVSIGELIAEAMDKVGKDGVITVEEAKGMATTLDIVEGMQFDRGYISPYFITDPERL
ECILEDAFVLIHDKKISTMKDLLPILEQIARMGRPLLIIAEDVEGEALATLVVNKLRGVL
QVCAV