Chaperonin ID: | b11976 |
Chaperonin Group: | I |
Deposit Date: | 2008-04-13 |
Type: | ref |
Type strain?: | no |
Genus: | Clostridium |
Species: | perfringens |
Strain: | D str. JGS1721 |
Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | ABOO01000018 |
Peptide Genbank Accession: | EDT71664 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From whole genome shotgun sequence. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAACATTATTATTCGGTGAAGAAGCAAGAAGATCTATGCAAGAGGGTGTAGAT AAATTAGCTAACACTGTTAAGGTTACATTAGGACCAAAAGGAAGAAATGTTATTTTAGAT AAAAAATTTGGATCACCATTAATAACAAATGATGGGGTTACAATAGCAAGAGAAATTGAA CTTGAAGATGCTTATGAAAATATGGGAGCTCAACTTGTAAAAGAAGTAGCTACAAAGACT AATGATGTGGCAGGAGATGGAACTACTACAGCTACATTATTAGCACAAGCAATTATAAGA GAAGGATTAAAAAATGTAACAGCAGGGGCAAATCCTATATTAATAAGAAATGGAATTAAA ACTGCAGTTGAAAAAGCTGTAGAGGAAATACAAAAAATTTCTAAGCCTGTAAATGGAAAA GAAGACATAGCTAGAGTTGCTGCAATTTCAGCGGCTGATGAAAAAATTGGTAAGCTAATT GCAGATGCTATGGAAAAGGTAGGAAATGAAGGCGTTATAACTGTAGAAGAATCTAAATCA ATGGGAACTGAGTTAGATGTTGTTGAAGGTATGCAATTTGATAGAGGATATGTATCAGCT TATATGGTTACTGATACTGAAAAAATGGAAGCTGTTTTAGATAATCCATTAGTATTAATA ACAGATAAGAAAATAAGCAATATACAAGACTTATTACCATTACTTGAGCAAATAGTTCAA GCAGGTAAAAAACTTTTAATAATAGCTGATGATATAGAAGGCGAAGCTATGACAACATTA GTTGTTAATAAATTAAGAGGAACATTTACTTGTGTTGGAGTTAAAGCACCTGGATTTGGT GATAGAAGAAAAGAAATGTTACAAGATATAGCTACTTTAACAGGAGGCGTTGTTATATCT GATGAAGTAGGCGGAGACTTAAAAGAAGCTACATTAGATATGCTTGGAGAAGCTGAAAGT GTTAAGGTAACTAAAGAAAGTACTACAATAGTTAATGGAAGAGGAAACTCAGAAGAGATT AAAAATAGAATTAACCAAATAAAATTACAATTAGAAGCTACTACTTCTGAATTTGACAAA GAAAAATTACAAGAAAGATTAGCAAAATTAGCAGGTGGGGTTGCAGTAGTTAAGGTTGGA GCTGCCACTGAAACAGAGCTTAAGGAAAGTAAGCTAAGAATAGAGGATGCTTTAGCAGCT ACAAAGGCAGCTGTTGAAGAAGGAATAGTTCCAGGTGGTGGAACAGCTTACGTAAATGTA ATAAATGAAGTTGCAAAATTAACTTCTGATATTCAAGATGAACAAGTTGGTATAAATATA ATTGTAAGATCTTTAGAAGAACCTATGAGACAAATAGCTCATAACGCAGGACTAGAAGGT TCAGTTATAATAGAGAAAGTTAAAAATAGTGATGCAGGTGTAGGATTTGATGCTTTAAGA GGAGAATATAAAGATATGATTAAAGCAGGAATAGTTGATCCAACTAAGGTTACAAGATCA GCTCTTCAAAATGCAGCATCAGTAGCATCAACATTCTTAACAACAGAGGCTGCTGTAGCA GATATTCCAGAAAAAGAAATGCCTCAAGGTGCAGGTATGGGAATGGACGGAATGTATTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKTLLFGEEARRSMQEGVDKLANTVKVTLGPKGRNVILDKKFGSPLITNDGVTIAREIE LEDAYENMGAQLVKEVATKTNDVAGDGTTTATLLAQAIIREGLKNVTAGANPILIRNGIK TAVEKAVEEIQKISKPVNGKEDIARVAAISAADEKIGKLIADAMEKVGNEGVITVEESKS MGTELDVVEGMQFDRGYVSAYMVTDTEKMEAVLDNPLVLITDKKISNIQDLLPLLEQIVQ AGKKLLIIADDIEGEAMTTLVVNKLRGTFTCVGVKAPGFGDRRKEMLQDIATLTGGVVIS DEVGGDLKEATLDMLGEAESVKVTKESTTIVNGRGNSEEIKNRINQIKLQLEATTSEFDK EKLQERLAKLAGGVAVVKVGAATETELKESKLRIEDALAATKAAVEEGIVPGGGTAYVNV INEVAKLTSDIQDEQVGINIIVRSLEEPMRQIAHNAGLEGSVIIEKVKNSDAGVGFDALR GEYKDMIKAGIVDPTKVTRSALQNAASVASTFLTTEAAVADIPEKEMPQGAGMGMDGMY |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACATTATTAGCACAAGCAATTATAAGAGAAGGATTAAAAAATGTAACAGCAGGGGCA AATCCTATATTAATAAGAAATGGAATTAAAACTGCAGTTGAAAAAGCTGTAGAGGAAATA CAAAAAATTTCTAAGCCTGTAAATGGAAAAGAAGACATAGCTAGAGTTGCTGCAATTTCA GCGGCTGATGAAAAAATTGGTAAGCTAATTGCAGATGCTATGGAAAAGGTAGGAAATGAA GGCGTTATAACTGTAGAAGAATCTAAATCAATGGGAACTGAGTTAGATGTTGTTGAAGGT ATGCAATTTGATAGAGGATATGTATCAGCTTATATGGTTACTGATACTGAAAAAATGGAA GCTGTTTTAGATAATCCATTAGTATTAATAACAGATAAGAAAATAAGCAATATACAAGAC TTATTACCATTACTTGAGCAAATAGTTCAAGCAGGTAAAAAACTTTTAATAATAGCTGAT GATATAGAAGGCGAAGCTATGACAACATTAGTTGTTAATAAATTAAGAGGAACATTTACT TGTGTTGGAGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLAQAIIREGLKNVTAGANPILIRNGIKTAVEKAVEEIQKISKPVNGKEDIARVAAIS AADEKIGKLIADAMEKVGNEGVITVEESKSMGTELDVVEGMQFDRGYVSAYMVTDTEKME AVLDNPLVLITDKKISNIQDLLPLLEQIVQAGKKLLIIADDIEGEAMTTLVVNKLRGTFT CVGV |