Chaperonin ID: | b11940 |
Chaperonin Group: | I |
Deposit Date: | 2008-03-30 |
Type: | fie |
Type strain?: | no |
Genus: | Leptothrix |
Species: | cholodnii |
Strain: | SP-6 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; unclassified Burkholderiales; Burkholderiales Genera incertae sedis; Leptothrix |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NC_010524 |
Peptide Genbank Accession: | YP_001789523 |
Best FASTA Match: | b29975 Pelomonas puraquae CCUG 52769 (see fasta results) |
Date of FASTA search: | 2024-07-22 |
FASTA identity %: | 93.500 |
Best BLASTP Match: | b30177 Albidiferax sp. OV413 (see blastp results) |
Date of BLASTP search: | 2024-07-22 |
BLASTP identity %: | 96.757 |
Source: | Genbank |
Notes: | Isolated from water and flocculent from an artificial iron seep in Ithaca, NY. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTGATCTTTGGCGGCGAGGCACGTGCCCGCATGGTCGAAGGCGTG AACATCCTGGCCAACGCGGTCAAGGTCACCCTGGGCCCCAAGGGTCGCAACGTGGTGCTC GAGCGCTCGTTCGGCGCCCCGACCGTGACCAAGGACGGTGTGTCCGTGGCCAAGGAAATC GAGCTCAAGGACAAGCTGCAGAACATGGGCGCGCAGATGGTCAAGGAAGTTGCTTCCAAG ACCAGCGACAACGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCATCGTG CGCGAAGGCATGAAGTACGTGGCCGCCGGCATGAACCCGATGGATCTGAAGCGCGGCATC GACAAGGCGGTGCACGCCCTGGTCGCCGAGCTGAAGAAGGCTTCGAAGGCCACCACGACG TCGAAGGAAATCGCCCAGGTTGGCTCGATCTCGGCCAACAGCGACGAATCGATCGGCACC ATCATCGCCAACGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGC AAGTCGCTGGACAACGAGCTCGACGTCGTCGAAGGCATGCAGTTCGACCGCGGCTACCTG TCGCCGTACTTCATCAACAACCCCGAGAAGCAAGCCGCGCTGCTGGACAACCCGTTCGTC CTGCTGTTCGACAAGAAGATCTCGAACATCCGCGACCTGCTGCCCACGCTGGAGCAGGTG GCCAAGGCCGGCCGTCCGCTGCTGATCATTGCTGAAGAAGTCGACGGCGAAGCGCTGGCG ACCCTGGTGGTCAACACCATCCGCGGCATCCTGAAGGTCGTGGCCGTCAAGGCGCCTGGC TTCGGCGACCGCCGCAAGGCCATGCTCGAAGACATCGCCATCCTGACCGGCGGCAAGGTC ATCGCCGAAGAAGTCGGCCTGACGCTCGAGAAGGTCACGCTGGCCGATCTGGGCCAGGCC AAGCGCGTCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGCGCCGGTGCCGCTGGC GACATCGAAGCCCGCGTCAAGCAGATCCGCATCCAGATCGAAGAAGCCACCAGCGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGTGTTGCACTGATCAAG GTCGGCGCGGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCCCGTGTCGAAGACGCCCTG CACGCAACCCGCGCAGCCGTCGAAGAAGGCATCGTGGCTGGCGGCGGCGTGGCTCTGCTG CGTGCCAAGCAGGCTGCTGGCGAGATCAAGGGCGACAACGCCGACCAGGACGCCGGCATC AAGCTGGTCCTGAAGGCGATCGAAGCCCCGCTGCGCGAAATCGTCTACAACGCCGGCGGC GAAGCCTCCGTCGTCGTGAACGCCGTGCTGGCCGGTTCGGGCAACTACGGCTTCAACGCC GCCAACGACACCTATGGCGACATGATCGAAATGGGCATCCTGGACCCGACCAAGGTGACC CGCACCGCGCTGCAGAACGCCGCGTCGGTCGCATCGCTGATGCTGACCACCGAGTGCATG GTTGCCGAGGCTCCGAAGGATGAAGCCGCCGGCGGCGGCATGCCCGGCGGCATGGGTGGC ATGGGCGGCATGGGCGGCATGGACATGTGA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI DKAVHALVAELKKASKATTTSKEIAQVGSISANSDESIGTIIANAMDKVGKEGVITVEDG KSLDNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEQV AKAGRPLLIIAEEVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV IAEEVGLTLEKVTLADLGQAKRVEVGKENTTIIDGAGAAGDIEARVKQIRIQIEEATSDY DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RAKQAAGEIKGDNADQDAGIKLVLKAIEAPLREIVYNAGGEASVVVNAVLAGSGNYGFNA ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVAEAPKDEAAGGGMPGGMGG MGGMGGMDM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCCAGGCCATCGTGCGCGAAGGCATGAAGTACGTGGCCGCCGGCATG AACCCGATGGATCTGAAGCGCGGCATCGACAAGGCGGTGCACGCCCTGGTCGCCGAGCTG AAGAAGGCTTCGAAGGCCACCACGACGTCGAAGGAAATCGCCCAGGTTGGCTCGATCTCG GCCAACAGCGACGAATCGATCGGCACCATCATCGCCAACGCGATGGACAAGGTCGGCAAG GAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGGACAACGAGCTCGACGTCGTCGAA GGCATGCAGTTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCCGAGAAGCAA GCCGCGCTGCTGGACAACCCGTTCGTCCTGCTGTTCGACAAGAAGATCTCGAACATCCGC GACCTGCTGCCCACGCTGGAGCAGGTGGCCAAGGCCGGCCGTCCGCTGCTGATCATTGCT GAAGAAGTCGACGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGCGGCATCCTG AAGGTCGTGGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVHALVAELKKASKATTTSKEIAQVGSIS ANSDESIGTIIANAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQ AALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLIIAEEVDGEALATLVVNTIRGIL KVVAV |