RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10128 |
| Chaperonin Group: | I |
| Deposit Date: | 2007-04-23 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Haemophilus |
| Species: | influenzae |
| Strain: | 22.1-21 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AAZD01000002 |
| Peptide Genbank Accession: | EDJ89080 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Strain 22.1-21 is a non-typeable Haemophilus influenzae (NTHi). This commensal isolate and Haemophilus influenzae strain 22.4-21 were both recovered from the nasopharynx of the same healthy child. These strains exhibit previously described sequence types (22.1-21 is ST176 and 22.4-21 is ST165). Sequence is from whole genome shotgun sequence. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTAAAATTTGGTAATGACGCACGCGTAAAAATGCTTAAAGGCGTG AATGTATTAGCGGATGCAGTAAAAGTAACCCTTGGCCCAAAAGGTCGTAATGTAATTTTA GATAAATCATTTGGCGCACCAACTATCACTAAAGACGGTGTGTCTGTTGCTCGTGAAATC GAATTAGAAGATAAATTCGAGAACATGGGGGCACAAATGGTGAAAGAAGTGGCATCTAAA GCAAATGATGCTGCAGGTGACGGTACAACTACTGCAACTGTACTTGCGCAAGCTATCGTA AATGAAGGCTTGAAAGCAGTAGCTGCAGGTATGAATCCAATGGATTTAAAACGTGGTATT GATAAAGCAGTAAGTGCGGTTGTTTCTGAACTTAAAAATTTATCTAAACCTTGTGAAACA GCAAAAGAAATTGAACAAGTAGGTACCATTTCTGCAAACTCTGACAGCATTGTGGGGCAA TTAATCTCACAAGCGATGGAAAAAGTGGGCAAGGAAGGTGTAATTACTGTTGAAGATGGT ACGGGTCTTGAAGATGAATTAGATGTGGTTGAAGGCATGCAATTCGACCGTGGTTACCTT TCTCCATATTTCATCAACAAACCAGAAACTGCAACGGTTGAATTAGATAATCCATATCTT CTTCTTGTAGATAAAAAAATCTCTAACATTCGTGAATTACTTCCTGTGTTAGAAGGTGTA GCGAAAGCAGGTAAACCGTTATTAATCATCGCTGAAGATGTGGAAGGCGAAGCGCTTGCA ACCTTAGTAGTAAACACTATGCGCGGTATCGTGAAAGTTGCAGCAGTGAAAGCACCAGGT TTTGGTGATCGTCGTAAAGCGATGTTACAAGATATTGCGATCTTAACTGCAGGTACTGTG ATTTCTGAAGAAATCGGTATGGAGCTTGAAAAAGCAACATTGGAAGATTTAGGTCAAGCA AAACGTGTTGTTATCAATAAAGATAACACAACCATTATTGATGGTATCGGCGATGAAGCA CAAATCAAAGGTCGTGTGGCTCAAATTCGTCAGCAAATCGAAGAATCAACTTCTGACTAC GACAAAGAAAAACTCCAAGAACGCGTGGCTAAATTAGCAGGCGGTGTGGCAGTAATCAAA GTGGGCGCAGCAACTGAAGTTGAAATGAAAGAGAAAAAAGACCGTGTAGATGATGCACTA CATGCAACTCGTGCAGCAGTTGAAGAAGGTATCGTTGCTGGTGGTGGCGTTGCATTAGTT CGCGCAGCAGCGAAAGTTGCAGCAAGCCTAAAAGGTGACAACGAAGAACAAAATGTGGGT ATCAAACTTGCATTACGTGCGATGGAAGCGCCTTTACGTCAAATCGTCACTAACGCAGGT GAAGAAGCTTCAGTTGTGGCAAGTGCGGTTAAAAATGGCGAAGGAAACTTTGGTTATAAT GCAGGAACAGAACAATACGGCGATATGATCGAAATGGGTATCTTAGATCCAACTAAAGTC ACTCGTTCTGCATTGCAATTCGCAGCTTCTGTAGCAGGCTTAATGATTACCACTGAATGT ATGGTAACTGATCTTCCAAAAGATGATAAAGCCGATTTAGGTGCTGCTGGAATGGGCGGT ATGGGTGGAATGGGCGGAATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVILDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVSAVVSELKNLSKPCETAKEIEQVGTISANSDSIVGQLISQAMEKVGKEGVITVEDG TGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDNPYLLLVDKKISNIRELLPVLEGV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV ISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVASAVKNGEGNFGYN AGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDKADLGAAGMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTACTTGCGCAAGCTATCGTAAATGAAGGCTTGAAAGCAGTAGCTGCAGGTATG AATCCAATGGATTTAAAACGTGGTATTGATAAAGCAGTAAGTGCGGTTGTTTCTGAACTT AAAAATTTATCTAAACCTTGTGAAACAGCAAAAGAAATTGAACAAGTAGGTACCATTTCT GCAAACTCTGACAGCATTGTGGGGCAATTAATCTCACAAGCGATGGAAAAAGTGGGCAAG GAAGGTGTAATTACTGTTGAAGATGGTACGGGTCTTGAAGATGAATTAGATGTGGTTGAA GGCATGCAATTCGACCGTGGTTACCTTTCTCCATATTTCATCAACAAACCAGAAACTGCA ACGGTTGAATTAGATAATCCATATCTTCTTCTTGTAGATAAAAAAATCTCTAACATTCGT GAATTACTTCCTGTGTTAGAAGGTGTAGCGAAAGCAGGTAAACCGTTATTAATCATCGCT GAAGATGTGGAAGGCGAAGCGCTTGCAACCTTAGTAGTAAACACTATGCGCGGTATCGTG AAAGTTGCAGCAGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAVVSELKNLSKPCETAKEIEQVGTIS ANSDSIVGQLISQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETA TVELDNPYLLLVDKKISNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |