Chaperonin ID: | b10127 |
Chaperonin Group: | I |
Deposit Date: | 2007-04-23 |
Type: | ref |
Type strain?: | no |
Genus: | Haemophilus |
Species: | influenzae |
Strain: | 22.4-21 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | AAZE01000002 |
Peptide Genbank Accession: | EDJ91448 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Strain 22.4-21 is a non-typeable Haemophilus influenzae (NTHi). This commensal isolate and Haemophilus influenzae strain 22.1-21 were both recovered from the nasopharynx of the same healthy child. These strains exhibit previously described sequence types (22.1-21 is ST176 and 22.4-21 is ST165). Sequence is from whole genome shotgun sequence. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTAAAATTTGGTAATGACGCACGCGTAAAAATGCTTAAAGGCGTG AATGTATTAGCGGATGCAGTAAAAGTAACCCTTGGCCCGAAAGGTCGTAATGTAATTTTA GATAAATCATTTGGCGCGCCAACTATCACTAAAGACGGTGTGTCTGTTGCTCGTGAAATC GAATTAGAGGATAAATTCGAAAATATGGGCGCACAAATGGTAAAAGAAGTGGCATCTAAA GCAAATGATGCTGCAGGTGACGGTACAACTACTGCAACTGTACTTGCGCAAGCTATCGTA AATGAAGGCTTGAAAGCAGTAGCTGCAGGTATGAATCCAATGGATTTAAAACGTGGTATT GATAAAGCAGTAAGTGCGGTTGTTTCTGAACTTAAAAATTTATCTAAACCTTGTGAAACC TCTAAAGAAATTGAACAAGTAGGGACTATTTCTGCAAACTCTGACAGCATTGTGGGTCAA TTAATCTCACAAGCAATGGAAAAAGTGGGCAAGGAAGGGGTAATTACTGTTGAAGATGGT ACGGGTCTTGAAGATGAATTAGATGTGGTTGAAGGTATGCAATTCGACCGTGGTTACCTT TCTCCATATTTCATCAACAAACCAGAAACTGCAACTGTTGAATTAGATAATCCATATCTT CTTCTTGTAGATAAAAAAATCTCTAACATTCGTGAATTACTTCCCGTGTTAGAAGGCGTT GCGAAAGCAGGTAAACCGTTATTAATCATCGCTGAAGATGTGGAAGGCGAAGCGCTTGCA ACCTTAGTAGTAAACACGATGCGCGGTATCGTGAAAGTTGCAGCCGTGAAAGCACCAGGT TTTGGTGATCGTCGTAAAGCGATGTTACAAGATATTGCAATTTTAACAACGGGTACTGTG ATTTCTGAAGAAATTGGTATGGAGCTTGAAAAAGCAACATTGGAAGATTTAGGTCAAGCA AAACGTGTTGTTATCAATAAAGATAACACAACCATTATTGATGGTATCGGCGATGAAGCA CAAATCAAAGGTCGTGTGGCTCAAATTCGTCAGCAAATCGAAGAATCAACTTCTGACTAC GACAAAGAAAAACTCCAAGAACGCGTGGCTAAATTAGCAGGCGGTGTAGCAGTAATCAAA GTGGGCGCAGCAACTGAAGTTGAAATGAAAGAGAAAAAAGATCGTGTAGATGATGCACTA CATGCAACTCGTGCAGCGGTTGAAGAAGGTATCGTTGCTGGTGGTGGCGTTGCATTAGTT CGTGCAGCAGCGAAAGTTGCAGCAAGCCTAAAAGGTGACAATGAAGAACAAAATGTGGGT ATCAAACTTGCATTACGTGCGATGGAAGCACCTTTACGTCAAATCGTCACTAACGCAGGT GAAGAAGCTTCAGTTGTGGCAAGTGCGGTTAAAAATGGCGAAGGAAACTTTGGTTATAAT GCAGGAACAGAACAGTACGGCGATATGATCGAAATGGGTATCTTAGATCCAACTAAAGTC ACTCGTTCTGCATTGCAATTCGCAGCTTCTGTAGCAGGCTTAATGATTACCACTGAATGT ATGGTAACTGATCTTCCAAAAGATGATAAAGCCGATTTAGGTGCTGCTGGAATGGGCGGT ATGGGTGGAATGGGCGGAATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVILDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVSAVVSELKNLSKPCETSKEIEQVGTISANSDSIVGQLISQAMEKVGKEGVITVEDG TGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDNPYLLLVDKKISNIRELLPVLEGV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTTGTV ISEEIGMELEKATLEDLGQAKRVVINKDNTTIIDGIGDEAQIKGRVAQIRQQIEESTSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAAAKVAASLKGDNEEQNVGIKLALRAMEAPLRQIVTNAGEEASVVASAVKNGEGNFGYN AGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDKADLGAAGMGG MGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTACTTGCGCAAGCTATCGTAAATGAAGGCTTGAAAGCAGTAGCTGCAGGTATG AATCCAATGGATTTAAAACGTGGTATTGATAAAGCAGTAAGTGCGGTTGTTTCTGAACTT AAAAATTTATCTAAACCTTGTGAAACCTCTAAAGAAATTGAACAAGTAGGGACTATTTCT GCAAACTCTGACAGCATTGTGGGTCAATTAATCTCACAAGCAATGGAAAAAGTGGGCAAG GAAGGGGTAATTACTGTTGAAGATGGTACGGGTCTTGAAGATGAATTAGATGTGGTTGAA GGTATGCAATTCGACCGTGGTTACCTTTCTCCATATTTCATCAACAAACCAGAAACTGCA ACTGTTGAATTAGATAATCCATATCTTCTTCTTGTAGATAAAAAAATCTCTAACATTCGT GAATTACTTCCCGTGTTAGAAGGCGTTGCGAAAGCAGGTAAACCGTTATTAATCATCGCT GAAGATGTGGAAGGCGAAGCGCTTGCAACCTTAGTAGTAAACACGATGCGCGGTATCGTG AAAGTTGCAGCCGTG |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAVVSELKNLSKPCETSKEIEQVGTIS ANSDSIVGQLISQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETA TVELDNPYLLLVDKKISNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |