RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b9562 |
Chaperonin Group: | I |
Deposit Date: | 2006-12-11 |
Type: | ref |
Type strain?: | yes |
Genus: | Sphingomonas |
Species: | wittichii |
Strain: | RW1 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Alphaproteobacteria; Sphingomonadales; Sphingomonadaceae; Sphingomonas |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | CP000699 |
Peptide Genbank Accession: | ABQ69722 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From whole genome sequence. Type strain synonyms strain RW1 = EY 4224 = CCUG 31198 = DSM 6014 = JCM 10273 = SMUM 2128. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCGAAAGACGTCAAGTTTTCGCGCGACGCCCGTGAGCGCATCCTGCGCGGCGTC GACATCCTCGCCGACGCGGTGAAGGTCACGCTGGGCCCGAAGGGCCGCAACGTCGTCATC GACAAGTCGTTCGGCGCCCCGCGCATCACCAAGGACGGCGTCACCGTCGCCAAGGAAATC GAGCTGAAGGACAAGTTCGAGAACATCGGCGCGCAGCTCGTCCGCGAAGTCGCCTCGAAG ACCAACGACCTGGCCGGCGACGGCACCACCACCGCCACCGTGCTCGCCCAGGCGATCGTC CGCGAGGGCCTGAAGTCGGTCGCGGCCGGCATGAACCCGATGGACCTGAAGCGCGGCATC GACCTCGCCGTCACCAAGGTCGTCGAGAACCTCAAGGCCCGCTCGAAGCCGGTCGCCGGC TCGAACGAAGTCGCCCAGGTCGGCATCATCTCGGCCAATGGCGACAAGGAAGTCGGCGAG AAGATCGCGGAAGCGATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTCGAGGAGGCC AAGGGCCTCGAGTTCGAGCTCGACGTCGTCGAGGGCATGCAGTTCGACCGCGGCTACCTC TCGCCCTACTTCATCACCAACCCGGAGAAGATGCAGGTCGAGCTGACCGACCCGTACATC CTCATCCATGAGAAGAAGCTGTCGAACCTGCAGTCGATCCTGCCGATCCTCGAGGCGGTC GTGCAGTCGGGCCGTCCGCTGTTGATCATCGCCGAGGACATCGAGGGCGAGGCGCTGGCC ACCCTGGTCGTCAACAAGCTGCGCGGCGGCCTGAAGGTCGCGGCCGTCAAGGCGCCGGGC TTCGGCGATCGCCGCAAGGCGATGCTCGAGGACATCGCGATCCTGACCAACGGCGAGCTG ATCTCCGAGGATCTCGGCATCAAGCTCGAGAACGTCACCATCGGCATGCTCGGCACCGCC AAGCGCGTCACGATCGACAAGGACAACACCACCATCGTCGATGGCGCCGGTGCGGCCGAT GCGATCAAGGGCCGCGTCGAGGCGATCCGCAAGCAGATCGAGATCACCACGTCCGACTAT GACCGCGAGAAGCTCCAGGAGCGCCTGGCCAAGCTCGCCGGCGGCGTCGCCGTCATCAAG GTCGGCGGTGCGACCGAGGTCGAAGTGAAGGAGCGCAAGGACCGCGTCGACGACGCGCTG CACGCGACCCGCGCGGCCGTCGAGGAAGGCATCGTCCCCGGTGGCGGCACCGCCCTCCTC TATGCGACCAAGGCGCTCGACGGCCTCAAGGGCGCGAACGACGACCAGACCCGCGGCATC GACATCATCCGTCGCGCCATCTCGGCTCCGGTCAAGCAGATCGCCCAGAACGCCGGCCAG GACGGCGCGGTCGTCGCCGGCAACCTGCTGCGCGAGAATGACGAGACCAAGGGCTTCAAC GCCGCGACCGACGTCTATGAGAACCTCGTCGCCGCCGGCGTGATCGACCCGACCAAGGTC GTCCGCACCGCGCTGCAGGACGCGGCCTCGGTCGCCGGCCTGCTCATCACCACCGAGGCG ACGATCGCCGAGCTGCCCGAGGACAAGGCCCCGGCCATGCCCGGCGGCGGCATGGGTGGC ATGGGCGGCATGGGCGGCATGGACTTCTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFSRDARERILRGVDILADAVKVTLGPKGRNVVIDKSFGAPRITKDGVTVAKEI ELKDKFENIGAQLVREVASKTNDLAGDGTTTATVLAQAIVREGLKSVAAGMNPMDLKRGI DLAVTKVVENLKARSKPVAGSNEVAQVGIISANGDKEVGEKIAEAMDKVGKEGVITVEEA KGLEFELDVVEGMQFDRGYLSPYFITNPEKMQVELTDPYILIHEKKLSNLQSILPILEAV VQSGRPLLIIAEDIEGEALATLVVNKLRGGLKVAAVKAPGFGDRRKAMLEDIAILTNGEL ISEDLGIKLENVTIGMLGTAKRVTIDKDNTTIVDGAGAADAIKGRVEAIRKQIEITTSDY DREKLQERLAKLAGGVAVIKVGGATEVEVKERKDRVDDALHATRAAVEEGIVPGGGTALL YATKALDGLKGANDDQTRGIDIIRRAISAPVKQIAQNAGQDGAVVAGNLLRENDETKGFN AATDVYENLVAAGVIDPTKVVRTALQDAASVAGLLITTEATIAELPEDKAPAMPGGGMGG MGGMGGMDF |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCCCAGGCGATCGTCCGCGAGGGCCTGAAGTCGGTCGCGGCCGGCATG AACCCGATGGACCTGAAGCGCGGCATCGACCTCGCCGTCACCAAGGTCGTCGAGAACCTC AAGGCCCGCTCGAAGCCGGTCGCCGGCTCGAACGAAGTCGCCCAGGTCGGCATCATCTCG GCCAATGGCGACAAGGAAGTCGGCGAGAAGATCGCGGAAGCGATGGACAAGGTCGGCAAG GAAGGCGTGATCACCGTCGAGGAGGCCAAGGGCCTCGAGTTCGAGCTCGACGTCGTCGAG GGCATGCAGTTCGACCGCGGCTACCTCTCGCCCTACTTCATCACCAACCCGGAGAAGATG CAGGTCGAGCTGACCGACCCGTACATCCTCATCCATGAGAAGAAGCTGTCGAACCTGCAG TCGATCCTGCCGATCCTCGAGGCGGTCGTGCAGTCGGGCCGTCCGCTGTTGATCATCGCC GAGGACATCGAGGGCGAGGCGCTGGCCACCCTGGTCGTCAACAAGCTGCGCGGCGGCCTG AAGGTCGCGGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGLKSVAAGMNPMDLKRGIDLAVTKVVENLKARSKPVAGSNEVAQVGIIS ANGDKEVGEKIAEAMDKVGKEGVITVEEAKGLEFELDVVEGMQFDRGYLSPYFITNPEKM QVELTDPYILIHEKKLSNLQSILPILEAVVQSGRPLLIIAEDIEGEALATLVVNKLRGGL KVAAV |