RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b9434 |
Chaperonin Group: | I |
Deposit Date: | 2006-10-09 |
Type: | ref |
Type strain?: | no |
Genus: | Bordetella |
Species: | avium |
Strain: | 197N |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Alcaligenaceae; Bordetella |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | AM167904 |
Peptide Genbank Accession: | CAJ48184 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From complete genome sequence of chicken pathogenic strain. Smallest Bordetella genome sequenced to date. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCCAAGCAAGTTCTGTTTGCCGATGATGCCCGCGTGCGCATTGTTCGCGGCGTG AATGTTCTCGCCAACGCTGTTAAGACCACCCTGGGCCCCAAGGGTCGCAACGTCGTGCTG GAGCGCTCCTTCGGCGCCCCGACCGTGACCAAGGACGGTGTGTCCGTCGCCAAGGAAATC GAACTGAAGGACAAGTTCGAAAACATCGGCGCCCAGCTCGTCAAGGACGTTGCCTCCAAG ACCTCCGACAACGCCGGTGACGGCACCACGACCGCCACCGTGCTGGCTCAAGCCATCGTT CAAGAAGGCTTGAAGTACGTTGCCGCCGGTTTCAACCCGATCGACCTGAAGCGCGGTATC GACAAGGCTGTCGCCGCCGCCGTGGTTGAGCTGAAGAAGGCCTCCAAGCCGGTCACGACC AGCAAGGAAATCGCCCAGGTTGGCTCGATCTCGGCCAACAGCGACAGCTCGATCGGCCAG ATCATCGCTGACGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGC AAGTCGCTGGAAAACGAACTGGATGTCGTCGAAGGCATGCAGTTTGACCGTGGCTATCTG TCGCCCTACTTCATCAACAACCCCGAAAAGCAAGTCGCCGCTCTGGACGATCCCTTCGTC CTGATCTACGACAAGAAGATCAGCAACATCCGTGATCTGCTGCCGGTGCTGGAGCAAGTC GCCAAGTCGAGCCGTCCGCTGCTGATCATCGCCGAAGACGTCGAGGGCGAAGCCCTGGCG ACCCTGGTGGTGAACAACATCCGTGGCATCCTGAAGACCACCGCCGTCAAGGCGCCGGGC TTTGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACGGGCGGCACCGTG ATCTCGGAAGAGACCGGCATGTCGCTGGAAAAGGCCACCCTGCAAGAACTGGGCCAAGCC AAGCGCATCGAAGTCGCCAAGGAAAACACCACGATCATCGACGGCGCCGGCGACGGCAAG TCGATCGAAGCGCGCGTCAAGCAAATCCGCGCCCAGATCGAGGAAGCGACCTCCGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGTGTTGCCGTGATCCGC GTCGGTGCCGCGACCGAAGTCGAAATGAAGGAAAAGAAAGCTCGCGTCGAAGACGCCCTG CACGCCACCCGCGCTGCAGTGGAAGAAGGCGTTGTGGCTGGCGGCGGCGTTGCCCTGCTG CGCGCCAAGCAAGCCATTGCCGGTCTGCAAGGCGACACGCCCGACCAGAACGCGGGCATC AAGCTGATCCTGCGCGCTGTGGAAGAGCCCCTGCGCACCATCGTGACCAACGCCGGCGAA GAAGCCAGCGTGGTGGTGAACAACGTCCTGAACGGCAAGGGTAACTACGGTTACAACGCC GCTACCGGCGAGTACACCGACCTGGTCGAGCAAGGCGTTCTGGACCCCACCAAGGTGACC CGTACCGCCCTGCAAAACGCCGCTTCGGTGGCCAGCCTGCTGCTGACGGCTGAAGCCGCC GTGGTGGAACTGGCTGAGGACAAGCCCGCTGCCCCGGCCATGCCCGGCGGCATGGGTGGC ATGGGCGGCATGGACTTCTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKQVLFADDARVRIVRGVNVLANAVKTTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKFENIGAQLVKDVASKTSDNAGDGTTTATVLAQAIVQEGLKYVAAGFNPIDLKRGI DKAVAAAVVELKKASKPVTTSKEIAQVGSISANSDSSIGQIIADAMDKVGKEGVITVEDG KSLENELDVVEGMQFDRGYLSPYFINNPEKQVAALDDPFVLIYDKKISNIRDLLPVLEQV AKSSRPLLIIAEDVEGEALATLVVNNIRGILKTTAVKAPGFGDRRKAMLEDIAILTGGTV ISEETGMSLEKATLQELGQAKRIEVAKENTTIIDGAGDGKSIEARVKQIRAQIEEATSDY DREKLQERVAKLAGGVAVIRVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALL RAKQAIAGLQGDTPDQNAGIKLILRAVEEPLRTIVTNAGEEASVVVNNVLNGKGNYGYNA ATGEYTDLVEQGVLDPTKVTRTALQNAASVASLLLTAEAAVVELAEDKPAAPAMPGGMGG MGGMDF |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCTCAAGCCATCGTTCAAGAAGGCTTGAAGTACGTTGCCGCCGGTTTC AACCCGATCGACCTGAAGCGCGGTATCGACAAGGCTGTCGCCGCCGCCGTGGTTGAGCTG AAGAAGGCCTCCAAGCCGGTCACGACCAGCAAGGAAATCGCCCAGGTTGGCTCGATCTCG GCCAACAGCGACAGCTCGATCGGCCAGATCATCGCTGACGCGATGGACAAGGTCGGCAAG GAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGGAAAACGAACTGGATGTCGTCGAA GGCATGCAGTTTGACCGTGGCTATCTGTCGCCCTACTTCATCAACAACCCCGAAAAGCAA GTCGCCGCTCTGGACGATCCCTTCGTCCTGATCTACGACAAGAAGATCAGCAACATCCGT GATCTGCTGCCGGTGCTGGAGCAAGTCGCCAAGTCGAGCCGTCCGCTGCTGATCATCGCC GAAGACGTCGAGGGCGAAGCCCTGGCGACCCTGGTGGTGAACAACATCCGTGGCATCCTG AAGACCACCGCCGTC |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVQEGLKYVAAGFNPIDLKRGIDKAVAAAVVELKKASKPVTTSKEIAQVGSIS ANSDSSIGQIIADAMDKVGKEGVITVEDGKSLENELDVVEGMQFDRGYLSPYFINNPEKQ VAALDDPFVLIYDKKISNIRDLLPVLEQVAKSSRPLLIIAEDVEGEALATLVVNNIRGIL KTTAV |