RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b8449 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-02-25 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Flavobacteriales |
| Species: | sp. |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteria; Flavobacteriales; unclassified Flavobacteriales |
| Original ID: | HTCC2170 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002157 |
| Peptide Genbank Accession: | EAR00549 |
| Best FASTA Match: | b28743 Maribacter ulvicola DSM 15366 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 84.800 |
| Best BLASTP Match: | b30034 Zobellia sp. OII3 1c (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 96.237 |
| Source: | Genbank |
| Notes: | From whole genome shotgun sequence. Isolate collected coastal Pacific Ocean, Newport, Oregon. |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGACATAAAATTTGATATAGAAGCACGTGATGGCTTAAGAAGAGGTGTTGAC GCACTGGCCAATGCGGTAAAAGTAACGTTGGGCCCAAAAGGGAGAAACGTAATCATAAGC AAATCATTCGGAGCGCCAGCAGTAACCAAAGATGGGGTTTCTGTTGCAAAAGAGATTGAA TTGGAAGATGCACTTGAAAATATGGGTGCCCAAATGGTAAAGGAAGTTGCTTCAAAAACC AATGACCTTGCAGGTGATGGTACAACGACTGCTACAGTTCTTGCTCAATCTATCGTAAAA GAAGGATTAAAGAATGTTGCAGCGGGTGCAAACCCAATGGATTTAAAAAGAGGTATCGAT AAGGCTGTGGAGGCCATCGTTGGTGATTTGACAAACCAATCCAAAAAAGTTGGTGACTCT TCTGAAAAAATAAAGCAAGTTGCTTCTATCTCTTCAAATAATGACGAAACAATTGGTGAG TTGATTGCCCAGGCTTTTGGCAAAGTTGGTAAAGAAGGTGTAATTACTGTTGAAGAAGCA AAGGGTACTGATACGTATGTTGATGTTGTTGAAGGAATGCAATTCGATAGAGGATATTTA TCTCCTTACTTCGTGACCGATTCAGAAAAGATGACTGCCGATTTAGAGAATCCTTATATT CTTTTGTTCGACAAGAAAATCTCTTCAATGAAAGACTTACTTCCTGTATTAGAGCCAGTG GCACAATCAGGTAAACCTCTTTTGATTATTGCCGAAGATGTTGATGGTGAAGCATTAGCC ACTCTAGTGGTAAACAAGCTAAGAGGATCATTGAAAATCGCTGCTGTTAAAGCCCCAGGT TTTGGTGACAGAAGAAAAGCAATGTTGGAAGATATCGCCATCTTGACAAAAGGAACTGTT ATTGCTGAGGAAAGAGGTTTCTCTTTGGACAATACAACCATTGACATGTTAGGTACGTGT GAAAAAGTATCAATTGACAAAGACAATACTACGATAGTAAACGGTGGTGGTGTTGCTAAA AACATTAAAACACGGGTCAATCAGATTAAATCTCAAATAGAGACGACAACATCTGACTAT GATAAAGAAAAATTGCAAGAGCGTTTGGCTAAATTGGCTGGTGGTGTTGCAGTTCTTTAT GTTGGCGCTGCCTCTGAGGTTGAAATGAAAGAAAAGAAAGATAGAGTTGATGATGCTTTA CATGCAACAAGAGCTGCAGTAGAAGAAGGTATTGTTGCCGGTGGTGGCGTTGCCTTAGTT CGTGCAAAAAATGCTCTTTCTAAAGTAAAAGCAGATAATGCTGATGAGGAAACTGGTCTA CAAATAGTAGCAAGAGCAATTGAATCTCCTTTGAGAACTATTGTTGAAAACGCTGGCGGA GAAGGTTCAGTAGTTGTTGCTAAAGTTCAAGACGGTAAAGGTGACTTTGGTTTCGATGCA AAATCAGAGAAATATGTTCAGATGTTCAAGGCCGGAATCATTGATCCTACTAAAGTAACA AGAGTAGCATTGGAAAATGCAGCTTCTGTTTCGGGAATGATCTTGACCACTGAATGTGCA TTGACCGACATTAAAGAAGATACCCCTCCGATGCCTCCAATGGGTGGCGGTGGCGGAATG CCTGGAATGATGTAG |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKFDIEARDGLRRGVDALANAVKVTLGPKGRNVIISKSFGAPAVTKDGVSVAKEIE LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQSIVKEGLKNVAAGANPMDLKRGID KAVEAIVGDLTNQSKKVGDSSEKIKQVASISSNNDETIGELIAQAFGKVGKEGVITVEEA KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMTADLENPYILLFDKKISSMKDLLPVLEPV AQSGKPLLIIAEDVDGEALATLVVNKLRGSLKIAAVKAPGFGDRRKAMLEDIAILTKGTV IAEERGFSLDNTTIDMLGTCEKVSIDKDNTTIVNGGGVAKNIKTRVNQIKSQIETTTSDY DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAKNALSKVKADNADEETGLQIVARAIESPLRTIVENAGGEGSVVVAKVQDGKGDFGFDA KSEKYVQMFKAGIIDPTKVTRVALENAASVSGMILTTECALTDIKEDTPPMPPMGGGGGM PGMM |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTTCTTGCTCAATCTATCGTAAAAGAAGGATTAAAGAATGTTGCAGCGGGTGCA AACCCAATGGATTTAAAAAGAGGTATCGATAAGGCTGTGGAGGCCATCGTTGGTGATTTG ACAAACCAATCCAAAAAAGTTGGTGACTCTTCTGAAAAAATAAAGCAAGTTGCTTCTATC TCTTCAAATAATGACGAAACAATTGGTGAGTTGATTGCCCAGGCTTTTGGCAAAGTTGGT AAAGAAGGTGTAATTACTGTTGAAGAAGCAAAGGGTACTGATACGTATGTTGATGTTGTT GAAGGAATGCAATTCGATAGAGGATATTTATCTCCTTACTTCGTGACCGATTCAGAAAAG ATGACTGCCGATTTAGAGAATCCTTATATTCTTTTGTTCGACAAGAAAATCTCTTCAATG AAAGACTTACTTCCTGTATTAGAGCCAGTGGCACAATCAGGTAAACCTCTTTTGATTATT GCCGAAGATGTTGATGGTGAAGCATTAGCCACTCTAGTGGTAAACAAGCTAAGAGGATCA TTGAAAATCGCTGCTGTT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVKEGLKNVAAGANPMDLKRGIDKAVEAIVGDLTNQSKKVGDSSEKIKQVASI SSNNDETIGELIAQAFGKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTDSEK MTADLENPYILLFDKKISSMKDLLPVLEPVAQSGKPLLIIAEDVDGEALATLVVNKLRGS LKIAAV |