RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b4508 |
| Chaperonin Group: | I |
| Deposit Date: | 2003-10-27 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Ruminococcus |
| Species: | flavefaciens |
| Strain: | FD-1 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | AY189823 |
| Peptide Genbank Accession: | AAP03434 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Antonopoulos et al. FEMS Microbiol. Lett. 227: 1-7 (2003) note close relationship to Clostridium spp |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAGGATATAAAGTACGGCGAAGACGCAAGAAAAGCACTTCAGGCAGGTATCGAC AAGCTTGCTGATACAGTAAGAATAACAATGGGTCCTAAGGGCAGAAACGTTGTCCTCGAC AAGAAGTTCGGCGCTCCCCTCATCACTAACGACGGTGTTACTATCGCTAAGGATATCGAG CTTGAGGACGCTTTCGAGAACATGGGCGCTCAGCTCGTCAAGGAAGTTGCTACAAAGACT AACGATGCTGCCGGTGACGGTACAACTACTGCTACTCTCCTCGCTCAGACTATCGTTCGT GAAGGTATGAAGAATATCGCAGCAGGCGCTAACCCGATGGTTCTCAAGAAGGGTATCGCA AAGGCTGTTGACGCTGCTGTAAAGGCTATCGTTGACAACTCAAAGGCTGTTCAGGGCAGC GAGGATATCGCAAGAGTAGGTACTGTTTCTTCTGCTGACGAGAACGTTGGTAAGCTCATC GCTGAGGCTATGGAAAAGGTAACTTCTGACGGAGTTATCACTATCGAAGAAAGCAAGACT GCCGAGACTTACAGCGAAGTAGTTGAGGGTATGCAGTTCGACAGAGGCTACATCTCACCT TTACATGGCTTACAGATGCCTGACAAGATGGAAGCTGTTTACGATGACGCTTACGTTCTT ATCACAGACAAGAAGATCTCATCTATCCAGGAGGATCCTCCCGCTCTTGAGCAAATCGTA AAGATGGGCCAGAAGGTCGTTATCATTGCTGAAGACGTTGAGGGCGAGGCTCTTACCAAC TATCATCCTCAACAACCCTCCCGTGGCACATTCAAGGTTGCTGCTGTTAAGGCTCCCGGC TTTGGCGACAGACGTAAGGAAATGCTGAAGGATATCGCAGTTCTCACAGGCGGTGAGGTC ATCTCATCCGAGCTTGGCCTTGAACTCAGCGAGACTCAGCTTTCACAGCTCGGTCAGGCT AAGCAGGTAGTTATCCAGAAGGAGAACACTATCATTGTTGACGGCGCAGGCGACAAGGAA GCTATCAAGTCAAGAGTTGCTCAGATCAGAGCCGCTATCGAGAATACAACTTCTGACTTC GACCGTGAGAAGCTCCAGGAGAGACTTGCTAAGCTTGCAGGCGGTGTTGCTGTTATCAAG GTCGGCGCTGCTACCGAGATCGAAATGAAGGAAAAGAAGCTCCGTATCGAGGACGCTCTC GCTGCTACAAAGGCTGCTGTTGAAGAGGGTATCGTAGCAGGCGGCGGTACAGCATTCGTA AATGCTATCCCTGCTGTTATCAAGCTCGTTCCTACACTGGAAGGTGACGAGAAGACAGGC GCTAAGATCATTCTCAAGGCTCTCGAAGCTCCTGTACGTCAGATCGCTGAGAACGCAGGT CTTGAAGGAAGCGTTATCGTTGACAAGATCATCCGTTCACGCAAGGTAGGCTACGGCTTC GATGCATACAACGAGGTTTACACAGACATGATCCCTGCAGGTATCGTTGATCCTACTAAG GTTACAAGAAGCGCACTCCAGAACGCTGCTTCTGTTGCTTCAATGGTTCTTACAACAGAG AGCCTTGTTGCTGACATCAAGGAAGACGCTCCTGCTGCTCCTGCAATGCCTGCCGGCGGA ATGTATTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKYGEDARKALQAGIDKLADTVRITMGPKGRNVVLDKKFGAPLITNDGVTIAKDIE LEDAFENMGAQLVKEVATKTNDAAGDGTTTATLLAQTIVREGMKNIAAGANPMVLKKGIA KAVDAAVKAIVDNSKAVQGSEDIARVGTVSSADENVGKLIAEAMEKVTSDGVITIEESKT AETYSEVVEGMQFDRGYISPLHGLQMPDKMEAVYDDAYVLITDKKISSIQEDPPALEQIV KMGQKVVIIAEDVEGEALTNYHPQQPSRGTFKVAAVKAPGFGDRRKEMLKDIAVLTGGEV ISSELGLELSETQLSQLGQAKQVVIQKENTIIVDGAGDKEAIKSRVAQIRAAIENTTSDF DREKLQERLAKLAGGVAVIKVGAATEIEMKEKKLRIEDALAATKAAVEEGIVAGGGTAFV NAIPAVIKLVPTLEGDEKTGAKIILKALEAPVRQIAENAGLEGSVIVDKIIRSRKVGYGF DAYNEVYTDMIPAGIVDPTKVTRSALQNAASVASMVLTTESLVADIKEDAPAAPAMPAGG MY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTCTCCTCGCTCAGACTATCGTTCGTGAAGGTATGAAGAATATCGCAGCAGGCGCT AACCCGATGGTTCTCAAGAAGGGTATCGCAAAGGCTGTTGACGCTGCTGTAAAGGCTATC GTTGACAACTCAAAGGCTGTTCAGGGCAGCGAGGATATCGCAAGAGTAGGTACTGTTTCT TCTGCTGACGAGAACGTTGGTAAGCTCATCGCTGAGGCTATGGAAAAGGTAACTTCTGAC GGAGTTATCACTATCGAAGAAAGCAAGACTGCCGAGACTTACAGCGAAGTAGTTGAGGGT ATGCAGTTCGACAGAGGCTACATCTCACCTTTACATGGCTTACAGATGCCTGACAAGATG GAAGCTGTTTACGATGACGCTTACGTTCTTATCACAGACAAGAAGATCTCATCTATCCAG GAGGATCCTCCCGCTCTTGAGCAAATCGTAAAGATGGGCCAGAAGGTCGTTATCATTGCT GAAGACGTTGAGGGCGAGGCTCTTACCAACTATCATCCTCAACAACCCTCCCGTGGCACA TTCAAGGTTGCTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLAQTIVREGMKNIAAGANPMVLKKGIAKAVDAAVKAIVDNSKAVQGSEDIARVGTVS SADENVGKLIAEAMEKVTSDGVITIEESKTAETYSEVVEGMQFDRGYISPLHGLQMPDKM EAVYDDAYVLITDKKISSIQEDPPALEQIVKMGQKVVIIAEDVEGEALTNYHPQQPSRGT FKVAAV |