RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b28185 |
Chaperonin Group: | I |
Deposit Date: | 2016-10-29 |
Type: | ref |
Type strain?: | yes |
Genus: | Coprococcus |
Species: | comes |
Strain: | - |
Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus |
Original ID: | ATCC 27758 |
CUTC ID: | - |
Nucleotide Genbank Accession: | ABVR01000041 |
Peptide Genbank Accession: | EEG89459 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Type strain synonyms ATCC 27758= VPI C1-38. Reference genome for the Human Microbiome Project. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGGAAATTAAATACGGAGCAGACGCAAGAAAGGCACTGGAAGCAGGTGTCAAC AAACTTGCTGATACAGTAAGAGTAACAATCGGACCAAAAGGAAGAAACGTAGTTCTGGAT AAATCATTCGGAGCACCGCTTATCACAAATGACGGTGTAACAATCGCAAAAGAAATCGAA CTGGAAGATGCATTTGAAAATATGGGAGCACAGCTGATCCGTGAAGTTGCATCTAAGACC AACGATGTTGCAGGTGATGGTACAACAACAGCAACTGTTCTTGCACAGGCTATGGTACAC GAAGGAATGAAGAACCTGGAAGCAGGTGCAAACCCGATCGTATTAAGAAAAGGTATGAAG AAAGCAACAGACTGTGCTGTAGAAGCTATCAAGAAGATGAGTAGCAAAGTTACAGGAAGA GAGCAGATCGCAAGAGTAGCAGCTATCTCAGCAAGTGATGACAGTGTTGGTGAGATGGTA GCAGAAGCTATGGATAAAGTTTCCAACGATGGCGTTATCACAATTGAAGAGTCAAAGACA ATGAAGACAGAGCTTGACCTTGTAGAAGGTATGCAATTCGACCGTGGATATATTTCAGCA TATATGTGCACTGATATGGAAAAGATGGAAGCAAATCTTGACGATCCATATATCCTGATC ACAGACAAGAAGATTTCTAATATTCAGGAAATCCTTCCACTGCTGGAACAGATCGTACAG TCAGGAGCAAAACTTCTTATCGTAGCAGAAGATATCGAAGGAGAAGCTCTTACAACTCTG ATCGTCAACAAACTGCGTGGAACATTCAATGTAGTTGCAGTAAAAGCACCTGGATATGGT GACAGAAGAAAAGCTATGCTGGAAGATATTGCAATCTTAACAGGCGGACAGGTAATCTCA GAAGAACTTGGTCTGGAACTGAAAGATACAACAATGGCACAGCTTGGACGTGCAAAATCT GTAAAAGTTCAGAAAGAGAATACAGTCATCGTTGATGGTATGGGCGATAAGGCTGCTCTG GAAGCCAGAATCGGACAGATTAAAGCTCAGATCGAAGAGACAACATCTGATTTTGATAAA GAAAAACTTCAGGAAAGACTTGCAAAACTCGCCGGCGGAGTTGCAGTTATCCGTGTAGGT GCTGCTACTGAGACAGAGATGAAAGAAGCAAAACTCCGTATGGAAGATGCTCTTAATGCA ACAAGAGCAGCAGTAGAAGAAGGAATCATTGCAGGTGGTGGATCAGCATACATCCATGCA TCAAAAGAAGTTGCCAAACTTGCAGAAACTCTGGAAGGTGATGAAAAGACAGGGGCAAAA GTAGTCCTCAAAGCTCTGGAAGCACCATTATTCCACATTTCAGCTAACGCAGGTCTTGAA GGCGCAGTTATCATCAACAAGGTAAGAGAAGCTGAACCGGGAAATGGCTTTGATGCTTAC AATGAAGAATATGTAGATATGGTGAAAGCAGGTATCCTTGATCCTGCAAAAGTAACAAGA AGCGCACTGCAGAACGCTACAAGTGTTGCATCTACACTCCTTACAACAGAATCCGTTGTT GCTAACATCAAAGAAGATGCACCGGCTATGCCGGCAGGCGGAGCTCCGGGAATGGGCATG ATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKYGADARKALEAGVNKLADTVRVTIGPKGRNVVLDKSFGAPLITNDGVTIAKEIE LEDAFENMGAQLIREVASKTNDVAGDGTTTATVLAQAMVHEGMKNLEAGANPIVLRKGMK KATDCAVEAIKKMSSKVTGREQIARVAAISASDDSVGEMVAEAMDKVSNDGVITIEESKT MKTELDLVEGMQFDRGYISAYMCTDMEKMEANLDDPYILITDKKISNIQEILPLLEQIVQ SGAKLLIVAEDIEGEALTTLIVNKLRGTFNVVAVKAPGYGDRRKAMLEDIAILTGGQVIS EELGLELKDTTMAQLGRAKSVKVQKENTVIVDGMGDKAALEARIGQIKAQIEETTSDFDK EKLQERLAKLAGGVAVIRVGAATETEMKEAKLRMEDALNATRAAVEEGIIAGGGSAYIHA SKEVAKLAETLEGDEKTGAKVVLKALEAPLFHISANAGLEGAVIINKVREAEPGNGFDAY NEEYVDMVKAGILDPAKVTRSALQNATSVASTLLTTESVVANIKEDAPAMPAGGAPGMGM M |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTCTTGCACAGGCTATGGTACACGAAGGAATGAAGAACCTGGAAGCAGGTGCA AACCCGATCGTATTAAGAAAAGGTATGAAGAAAGCAACAGACTGTGCTGTAGAAGCTATC AAGAAGATGAGTAGCAAAGTTACAGGAAGAGAGCAGATCGCAAGAGTAGCAGCTATCTCA GCAAGTGATGACAGTGTTGGTGAGATGGTAGCAGAAGCTATGGATAAAGTTTCCAACGAT GGCGTTATCACAATTGAAGAGTCAAAGACAATGAAGACAGAGCTTGACCTTGTAGAAGGT ATGCAATTCGACCGTGGATATATTTCAGCATATATGTGCACTGATATGGAAAAGATGGAA GCAAATCTTGACGATCCATATATCCTGATCACAGACAAGAAGATTTCTAATATTCAGGAA ATCCTTCCACTGCTGGAACAGATCGTACAGTCAGGAGCAAAACTTCTTATCGTAGCAGAA GATATCGAAGGAGAAGCTCTTACAACTCTGATCGTCAACAAACTGCGTGGAACATTCAAT GTAGTTGCAGTA |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMVHEGMKNLEAGANPIVLRKGMKKATDCAVEAIKKMSSKVTGREQIARVAAIS ASDDSVGEMVAEAMDKVSNDGVITIEESKTMKTELDLVEGMQFDRGYISAYMCTDMEKME ANLDDPYILITDKKISNIQEILPLLEQIVQSGAKLLIVAEDIEGEALTTLIVNKLRGTFN VVAV |