RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b26845 |
Chaperonin Group: | I |
Deposit Date: | 2013-07-07 |
Type: | ref |
Type strain?: | no |
Genus: | Acidovorax |
Species: | avenae |
Strain: | subsp. avenae RS-1 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Comamonadaceae; Acidovorax |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | NZ_AFPT01000116 |
Peptide Genbank Accession: | WP_019702568 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Rice field isolate. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTAGTTTTCGGCGGCGAAGCCCGCGCTCGCATGGTCGAAGGCGTG AACATTCTCGCCAACGCCGTCAAGGTGACCCTGGGCCCCAAGGGCCGCAACGTGGTGCTC GAGCGCTCCTTCGGCGCCCCCACCGTGACCAAGGACGGCGTGTCCGTGGCCAAGGAAATC GAACTGAAGGACAAGCTGCAGAACATGGGCGCCCAGCTCGTGAAGGAAGTGGCTTCCAAG ACCAGCGACAACGCCGGTGACGGCACGACCACCGCCACGGTGCTGGCCCAGGCCATCGTG CGCGAAGGCTCCAAGTACGTGGCCGCCGGCCTGAACCCGATGGACCTCAAGCGCGGCATC GACAAGGCCGTGACGGCCCTGGTCGCCGAGCTGAAGAAGGCTTCCAAGGCCACGACGACC TCCAAGGAAATCGCCCAGGTGGGTTCGATCTCCGCCAACTCCGACGAATCCATCGGCAAG ATCATTGCCGACGCCATGGACAAGGTCGGCAAGGAAGGCGTGATCACCGTGGAAGACGGC AAGAGCCTGGACAACGAGCTGGACGTCGTGGAAGGCATGCAGTTCGACCGCGGCTACCTG TCGCCCTACTTCATCAACAACCCCGAAAAGCAGGCCGCCCTGCTGGACAACCCCTTCGTG CTGCTGTTCGACAAGAAGATCAGCAACATCCGTGACCTGCTGCCCACGCTGGAGCAGGTC GCCAAGGCCGGCCGTCCGCTGCTGATCATCGCCGAGGAAGTCGAGGGCGAAGCCCTGGCG ACCCTGGTGGTGAACACCATCCGCGGCATCCTGAAGGTCGTGGCCGTGAAGGCGCCTGGC TTCGGCGACCGCCGCAAGGCCATGCTGGAAGACATCGCCATCCTGACGGGCGGCAAGGTG ATCGCCGAGGAAGTGGGCCTGACGCTCGAGAAGGTGACCCTGGCCGACCTGGGCCAGGCC AAGCGCATCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGCGCAGGCGCTGCAGCT GACATCGAAGCCCGCGTGAAGCAGATCCGCATCCAGATCGAGGAAGCCACGAGCGACTAC GACCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTGGCCGTGATCAAG GTCGGCGCTGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCACGCGTGGAAGACGCACTG CACGCCACCCGCGCTGCCGTGGAAGAAGGCATCGTGGCCGGCGGCGGCGTGGCCCTGCTG CGCGCCAAGCAGGCTGCTGGCGAGATCAAGGGTGACAACCCCGATCAGGACGCCGGCATC AAGCTGATCCTGAAGGCGATCGAAGCGCCCCTGCGCGAGATCGTGGCCAACGCCGGTGGC GAGCCGTCCGTGGTGGTCAATGCCGTGCTGAACGGCAAGGGCAACTACGGCTTCAACGCC GCCAACGACACCTACGGCGACATGCTCGAAATGGGCATCCTGGACCCGACGAAGGTGACC CGCACGGCCCTGCAGAACGCCGCTTCCGTGGCTTCGCTGCTGCTGACGACCGAAGCCATG GTGGCCGAGGCTCCGAAGGACGATGCACCGGCTCCCGCGATGCCCGACATGGGCGGCATG GGCGGCATGGGCATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVVFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLQNMGAQLVKEVASKTSDNAGDGTTTATVLAQAIVREGSKYVAAGLNPMDLKRGI DKAVTALVAELKKASKATTTSKEIAQVGSISANSDESIGKIIADAMDKVGKEGVITVEDG KSLDNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEQV AKAGRPLLIIAEEVEGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV IAEEVGLTLEKVTLADLGQAKRIEVGKENTTIIDGAGAAADIEARVKQIRIQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RAKQAAGEIKGDNPDQDAGIKLILKAIEAPLREIVANAGGEPSVVVNAVLNGKGNYGFNA ANDTYGDMLEMGILDPTKVTRTALQNAASVASLLLTTEAMVAEAPKDDAPAPAMPDMGGM GGMGM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACGGTGCTGGCCCAGGCCATCGTGCGCGAAGGCTCCAAGTACGTGGCCGCCGGCCTG AACCCGATGGACCTCAAGCGCGGCATCGACAAGGCCGTGACGGCCCTGGTCGCCGAGCTG AAGAAGGCTTCCAAGGCCACGACGACCTCCAAGGAAATCGCCCAGGTGGGTTCGATCTCC GCCAACTCCGACGAATCCATCGGCAAGATCATTGCCGACGCCATGGACAAGGTCGGCAAG GAAGGCGTGATCACCGTGGAAGACGGCAAGAGCCTGGACAACGAGCTGGACGTCGTGGAA GGCATGCAGTTCGACCGCGGCTACCTGTCGCCCTACTTCATCAACAACCCCGAAAAGCAG GCCGCCCTGCTGGACAACCCCTTCGTGCTGCTGTTCGACAAGAAGATCAGCAACATCCGT GACCTGCTGCCCACGCTGGAGCAGGTCGCCAAGGCCGGCCGTCCGCTGCTGATCATCGCC GAGGAAGTCGAGGGCGAAGCCCTGGCGACCCTGGTGGTGAACACCATCCGCGGCATCCTG AAGGTCGTGGCCGTG |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGSKYVAAGLNPMDLKRGIDKAVTALVAELKKASKATTTSKEIAQVGSIS ANSDESIGKIIADAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQ AALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLIIAEEVEGEALATLVVNTIRGIL KVVAV |