RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b26259 |
| Chaperonin Group: | I |
| Deposit Date: | 2013-04-27 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Phocaeicola |
| Species: | massiliensis |
| Strain: | B84634 |
| Lineage: | root; cellular organisms; Bacteria; FCB group; Bacteroidetes/Chlorobi group; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Phocaeicola; Phocaeicola massiliensis |
| Original ID: | DSM 17679 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NZ_KB905472 |
| Peptide Genbank Accession: | WP_005941147 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms B84634 = CCUG 48901 = CIP 107942 = JCM 13223 = DSM 17679 = Timone 84634. Reclassified from Bacteroides massiliensis |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAGATATTAAATTCAACATTGATGCCCGTGACGAATTGAAGAAGGGTGTAGAC GAATTGGCTAACGCAGTGAAAGTAACCCTGGGTCCGAAAGGTCGTAATGTAATTATCGAA AAGAAATTCGGTGCTCCTCATATCACTAAGGATGGCGTGACTGTAGCTAAAGAAGTGGAA TTGGCTGATGCATTTCAGAATACGGGTGCACAGTTGGTGAAATCTGTTGCTTCAAAGACA GGTGACGATGCAGGTGACGGTACTACTACTGCTACTGTATTGGCTCAGTCAATTGTGGGT GTTGGTTTGAAGAATGTTACTGCCGGAGCAAATCCGATGGATTTGAAACGTGGTATCGAT AAAGCTGTTGCCAAAGTGGTTGAATCTATCAAGTCTCAGGCCGAAATGGTAGGTGACAAT TATGACAAGATTGAACAGGTGGCTGCTGTTTCTGCCAACAACGATCCTACTATCGGTAAG TTGATTGCAGACGCTATGCGTAAAGTTTCTAAAGATGGTGTGATTACTATCGAAGAAGCC AAAGGAACGGATACTACCATCGGTGTGGTAGAAGGTATGCAGTTCGACCGTGGTTACTTG TCTGCTTACTTTGTAACCGATACAGAAAAGATGGAATGTGTGATGGAACATCCGTACATC CTGATTTATGATAAGAAGATTTCTAATTTGAAGGATTTCTTGCCTATCCTGGAACCGGCT GTACAGAGCGGACGTCCTTTGTTGGTTATCGCAGAAGATGTAGACAGCGAAGCATTGACT ACGTTGGTTGTAAACCGTCTGCGTTCTCAGTTGAAGATTTGTGCTGTGAAAGCTCCGGGC TTCGGCGACCGTCGTAAGGCGATGTTGGAAGATATTGCCGTATTGACAGGTGGTATCGTT ATCAGCGAGGAAAAAGGTTTGAAGTTGGAACAAGCTACTCTTGAAATGTTGGGTACTTGC GATAAGGTAACTGTTTCTAAAGATAATACGACTATCGTAAACGGTGCCGGCGCAAAAGAA AACATTCAGGAACGTATCAATCAGATTAAAGCTGAAATAAAGAATACTACTTCAGATTAT GATAAGGAAAAGTTGCAGGAACGTTTGGCTAAGTTGTCAGGTGGTGTAGCTGTTCTTTAT GTAGGTGCCGCTTCTGAAGTTGAAATGAAGGAAAAGAAAGACCGTGTGGATGATGCATTG TGTGCTACTCGTGCAGCTATCGAAGAAGGTATCGTTCCGGGCGGTGGTGTAGCTTACATC CGTGCTTCTGAATCTTTGGAAGGTCTGAAAGGTGATAATGAAGACGAAACAACCGGCATC GAAATCATCAAGCGTGCCATCGAGGAACCGCTTCGTCAGATTGTTGCCAATGCAGGTAAG GAAGGTGCAGTAGTAGTACAGAAAGTACGCGAAGGTAAAGGTGACTTCGGTTACAATGCC CGTACTGACGTTTACGAAAACTTGCATGCTGCCGGTGTGGTAGATCCTGCTAAGGTAACT CGTGTAGCTTTGGAAAATGCTGCTTCTATTGCGGGTATGTTCCTTACTACAGAATGTGTA ATAGTAGAAAAGAAAGAAGATAAACCTGAAATGCCGATGGGTGCTCCCGGAATGGGTGGC ATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKFNIDARDELKKGVDELANAVKVTLGPKGRNVIIEKKFGAPHITKDGVTVAKEVE LADAFQNTGAQLVKSVASKTGDDAGDGTTTATVLAQSIVGVGLKNVTAGANPMDLKRGID KAVAKVVESIKSQAEMVGDNYDKIEQVAAVSANNDPTIGKLIADAMRKVSKDGVITIEEA KGTDTTIGVVEGMQFDRGYLSAYFVTDTEKMECVMEHPYILIYDKKISNLKDFLPILEPA VQSGRPLLVIAEDVDSEALTTLVVNRLRSQLKICAVKAPGFGDRRKAMLEDIAVLTGGIV ISEEKGLKLEQATLEMLGTCDKVTVSKDNTTIVNGAGAKENIQERINQIKAEIKNTTSDY DKEKLQERLAKLSGGVAVLYVGAASEVEMKEKKDRVDDALCATRAAIEEGIVPGGGVAYI RASESLEGLKGDNEDETTGIEIIKRAIEEPLRQIVANAGKEGAVVVQKVREGKGDFGYNA RTDVYENLHAAGVVDPAKVTRVALENAASIAGMFLTTECVIVEKKEDKPEMPMGAPGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTGTATTGGCTCAGTCAATTGTGGGTGTTGGTTTGAAGAATGTTACTGCCGGAGCA AATCCGATGGATTTGAAACGTGGTATCGATAAAGCTGTTGCCAAAGTGGTTGAATCTATC AAGTCTCAGGCCGAAATGGTAGGTGACAATTATGACAAGATTGAACAGGTGGCTGCTGTT TCTGCCAACAACGATCCTACTATCGGTAAGTTGATTGCAGACGCTATGCGTAAAGTTTCT AAAGATGGTGTGATTACTATCGAAGAAGCCAAAGGAACGGATACTACCATCGGTGTGGTA GAAGGTATGCAGTTCGACCGTGGTTACTTGTCTGCTTACTTTGTAACCGATACAGAAAAG ATGGAATGTGTGATGGAACATCCGTACATCCTGATTTATGATAAGAAGATTTCTAATTTG AAGGATTTCTTGCCTATCCTGGAACCGGCTGTACAGAGCGGACGTCCTTTGTTGGTTATC GCAGAAGATGTAGACAGCGAAGCATTGACTACGTTGGTTGTAAACCGTCTGCGTTCTCAG TTGAAGATTTGTGCTGTG |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVGVGLKNVTAGANPMDLKRGIDKAVAKVVESIKSQAEMVGDNYDKIEQVAAV SANNDPTIGKLIADAMRKVSKDGVITIEEAKGTDTTIGVVEGMQFDRGYLSAYFVTDTEK MECVMEHPYILIYDKKISNLKDFLPILEPAVQSGRPLLVIAEDVDSEALTTLVVNRLRSQ LKICAV |