RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b15925 |
Chaperonin Group: | I |
Deposit Date: | 2010-01-11 |
Type: | ref |
Type strain?: | no |
Genus: | Citrobacter |
Species: | rodentium |
Strain: | ICC168 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | FN543502 |
Peptide Genbank Accession: | CBG89926 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Citrobacter rodentium ICC168 is a wild-type strain shown to cause colonic epithelial cell hyperplasia in mice |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGTGGCGTT AACGTACTGGCAGATGCAGTAAAAGTAACCCTCGGTCCGAAAGGCCGTAACGTAGTGCTG GACAAATCCTTCGGCGCACCGACCATCACCAAAGATGGCGTTTCCGTAGCGCGTGAAATC GAACTGGAAGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAAGAAGTTGCCTCTAAA GCAAACGATGCGGCAGGCGACGGCACCACCACCGCAACCGTACTGGCTCAGGCGATCATC ACTGAAGGTCTGAAAGCCGTTGCTGCGGGCATGAACCCGATGGATCTGAAACGTGGTATC GATAAAGCGGTTACTGCTGCGGTTGAAGAACTGAAAGCGCTGTCCGTACCGTGCTCTGAC TCGAAAGCGATTGCTCAGGTAGGCACCATCTCCGCTAACTCCGACGAAACCGTAGGTAAA CTGATCGCTGAAGCGATGGATAAAGTCGGTAAAGAAGGCGTGATCACCGTTGAAGACGGC ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGCGGCTACCTG TCTCCGTACTTCATCAACAAGCCGGAAACTGGCGCTGTAGAACTGGAAAGCCCGTACATC CTGCTGGCTGACAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTGGAAGCCGTT GCGAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGACGTGGAAGGCGAAGCGCTGGCG ACGCTGGTGGTTAACACCATGCGCGGCATCGTGAAAGTGGCTGCGGTTAAAGCGCCGGGC TTCGGCGATCGTCGTAAAGCCATGCTGCAGGATATCGCTACCCTGACCGCCGGTACCGTT ATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCGACCCTGGAAGATCTGGGTCAGGCG AAACGCGTGGTGATCAACAAAGACACCACTACCATCATCGATGGCGTGGGCGAAGAAGCG GCAATTCAGGGTCGTGTGACTCAGATTCGTCAGCAGATCGAAGAAGCCACTTCCGACTAC GATCGTGAAAAATTGCAGGAGCGCGTAGCGAAACTGGCAGGCGGCGTTGCGGTAATCAAA GTTGGCGCAGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGACGCCCTG CACGCGACCCGTGCGGCGGTGGAAGAAGGCGTGGTTGCCGGCGGCGGCGTTGCGCTGATT CGCGCAGCATCGAAGATTGCCGATCTGAAAGGTCAGAACGAAGATCAGAACGTGGGTATC AAAGTCGCGCTGCGCGCGATGGAAGCGCCGCTGCGTCAGATCGTGCTGAACTGCGGCGAA GAACCGTCTGTTGTGGCGAACACCGTGAAAGGCGGCGACGGCAACTACGGTTACAATGCG GCGACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGACCCGACCAAAGTAACC CGTTCTGCACTGCAGTACGCGGCTTCTGTGGCTGGCCTGATGATCACCACCGAGTGCATG GTGACCGACCTGCCGAAAGGCGATGCGCCTGACTTAGGTGCTGCTGGTGGTATGGGCGGC ATGGGTGGTATGGGCGGCATGATGTAG |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPYILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVTQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RAASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG MGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCTCAGGCGATCATCACTGAAGGTCTGAAAGCCGTTGCTGCGGGCATG AACCCGATGGATCTGAAACGTGGTATCGATAAAGCGGTTACTGCTGCGGTTGAAGAACTG AAAGCGCTGTCCGTACCGTGCTCTGACTCGAAAGCGATTGCTCAGGTAGGCACCATCTCC GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGATAAAGTCGGTAAA GAAGGCGTGATCACCGTTGAAGACGGCACCGGTCTGCAGGACGAACTGGACGTGGTTGAA GGTATGCAGTTCGACCGCGGCTACCTGTCTCCGTACTTCATCAACAAGCCGGAAACTGGC GCTGTAGAACTGGAAAGCCCGTACATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGC GAAATGCTGCCGGTTCTGGAAGCCGTTGCGAAAGCAGGCAAACCGCTGCTGATCATCGCT GAAGACGTGGAAGGCGAAGCGCTGGCGACGCTGGTGGTTAACACCATGCGCGGCATCGTG AAAGTGGCTGCGGTT |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTIS ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPYILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |