RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b13698 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-05-09 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Pedobacter |
| Species: | heparinus |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Sphingobacteria; Sphingobacteriales; Sphingobacteriaceae; Pedobacter |
| Original ID: | DSM 2366 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013061 |
| Peptide Genbank Accession: | YP_003090531 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms ATCC 13125 = CCUG 12810 = CIP 104194 = CIP 105498 = DSM 2366 = IFO (now NBRC) 12017 = JCM 7457 = LMG 4024 = LMG 10339 = NCIB (now NCIMB) 9290 = NRRL B-14731. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAACAAGTAAAATATAATGTAGAAGCCCGCGATGCCCTGAAAAGAGGTGTTGAT ACGTTGGCCAATGCAGTAAAAGTAACTTTAGGTCCTAAAGGCCGCAACGTAATTATCGAT AAAAAATTTGGTTCACCTGCAATTACTAAAGATGGTGTAACTGTAGCAAAAGAAATTGAG TTGAAAGACCCGATTGAAAATATGGGTGCCCAGATGGTTAAAGAAGTAGCTTCTAAAACT GCAGACATTGCAGGTGACGGAACAACTACGGCAACTGTATTGGCACAGGCAATTGTTACT GCTGGCATTAAAAACGTGGCTGCCGGTGCAAATCCAATGGATTTGAAACGTGGTATCGAC AAAGCAGTTACTGCCATTGTTGAAAACCTGAAAGCCCAGTCGCAAACTGTAGGTGAAGAC AACAACAAGATCAAACAGGTAGCTTCTATTTCAGCTAACAATGATGAGGTTATTGGTGCT TTAATTGCAGAAGCAATGGGCAAAGTTGGTAAAGATGGTGTAATTACTGTTGAAGAAGCA AAAGGTACTGAAACTGAAGTTAAAACAGTTGAAGGTATGCAGTTTGACCGTGGTTACTTA TCTCCTTACTTTGTAACCAATGCCGATAAAATGGAAGCGGAATTAGAAAACCCTTACATT TTGATCTATGACAAAAAGATCAGCAACATGAAAGAATTGCTGCCTGTTCTGGAAAAACAA GTTCAGACTGGTAAGCCTTTATTGATCATTGCTGAAGATTTAGACGGTGAGGCCCTGGCT ACATTGGTAGTAAACAAAATCCGTGGCTCACTGAAAGTTGTTGCTGTTAAAGCTCCAGGT TTTGGCGACCGCAGAAAAGCTATGCTGGAAGACATTGCTATCTTAACTGGTGGTACTGTT ATTTCTGAAGAAAGAGGTTATAAATTAGAAAATGCTGACCTTACTTACTTAGGTACTGCT GAGAAAGTTGTTGTTGATAAAGACAATACTACTGTAATCAACGGTGCTGGTCAGTCGGAA GACATTAAAGCCCGTGTGAACCAGATCAAGGCTCAGATTGAGACCACTACATCTGATTAC GACAAAGAAAAGTTACAGGAGCGTTTGGCTAAATTAGCTGGTGGTGTTGCTGTTCTTTAT GTTGGTGCTGCTTCTGAAGTAGAGATGAAAGAGAAAAAAGACCGTGTTGATGATGCTTTA CATGCAACCCGCGCAGCGGTTGAAGAAGGTATTGTAGCAGGTGGTGGTGTGGCTTTCATC CGTGCTATTGAGGCATTGGAAGGCATGAAAGGATCTAACGATGATGAAACTACTGGTATC CAGATCATTCGTCGTGCTATCGAAGAGCCTTTACGTCAGATCTGCCAGAATGCTGGTATC GAAGGATCTATCGTAGTGCAAAAAGTTAAAGAAGGTAAAGCCGACTTTGGCTACAATGCA CGTACCGACGTTTATGAAAACTTAATTGCAGCTGGTGTAATCGATCCGACTAAAGTTGGT CGTGTAGCACTTGAAAACGCAGCTTCAATTGCAGCTATGCTGTTAACAACTGAAGTTGTA TTGGCTGACGATCCTGAAGAAGCTCCTGCCGGTGGTGCTGGTATGCCTCCAATGGGCGGC GGCGGCATGGGTGGTATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKQVKYNVEARDALKRGVDTLANAVKVTLGPKGRNVIIDKKFGSPAITKDGVTVAKEIE LKDPIENMGAQMVKEVASKTADIAGDGTTTATVLAQAIVTAGIKNVAAGANPMDLKRGID KAVTAIVENLKAQSQTVGEDNNKIKQVASISANNDEVIGALIAEAMGKVGKDGVITVEEA KGTETEVKTVEGMQFDRGYLSPYFVTNADKMEAELENPYILIYDKKISNMKELLPVLEKQ VQTGKPLLIIAEDLDGEALATLVVNKIRGSLKVVAVKAPGFGDRRKAMLEDIAILTGGTV ISEERGYKLENADLTYLGTAEKVVVDKDNTTVINGAGQSEDIKARVNQIKAQIETTTSDY DKEKLQERLAKLAGGVAVLYVGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVAFI RAIEALEGMKGSNDDETTGIQIIRRAIEEPLRQICQNAGIEGSIVVQKVKEGKADFGYNA RTDVYENLIAAGVIDPTKVGRVALENAASIAAMLLTTEVVLADDPEEAPAGGAGMPPMGG GGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTATTGGCACAGGCAATTGTTACTGCTGGCATTAAAAACGTGGCTGCCGGTGCA AATCCAATGGATTTGAAACGTGGTATCGACAAAGCAGTTACTGCCATTGTTGAAAACCTG AAAGCCCAGTCGCAAACTGTAGGTGAAGACAACAACAAGATCAAACAGGTAGCTTCTATT TCAGCTAACAATGATGAGGTTATTGGTGCTTTAATTGCAGAAGCAATGGGCAAAGTTGGT AAAGATGGTGTAATTACTGTTGAAGAAGCAAAAGGTACTGAAACTGAAGTTAAAACAGTT GAAGGTATGCAGTTTGACCGTGGTTACTTATCTCCTTACTTTGTAACCAATGCCGATAAA ATGGAAGCGGAATTAGAAAACCCTTACATTTTGATCTATGACAAAAAGATCAGCAACATG AAAGAATTGCTGCCTGTTCTGGAAAAACAAGTTCAGACTGGTAAGCCTTTATTGATCATT GCTGAAGATTTAGACGGTGAGGCCCTGGCTACATTGGTAGTAAACAAAATCCGTGGCTCA CTGAAAGTTGTTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVTAGIKNVAAGANPMDLKRGIDKAVTAIVENLKAQSQTVGEDNNKIKQVASI SANNDEVIGALIAEAMGKVGKDGVITVEEAKGTETEVKTVEGMQFDRGYLSPYFVTNADK MEAELENPYILIYDKKISNMKELLPVLEKQVQTGKPLLIIAEDLDGEALATLVVNKIRGS LKVVAV |