RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b13684 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-05-09 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Capnocytophaga |
| Species: | ochracea |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteria; Flavobacteriales; Flavobacteriaceae; Capnocytophaga |
| Original ID: | DSM 7271 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP001632 |
| Peptide Genbank Accession: | ACU91880 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms ATCC 27872 = CCUG 9716 = CIP 103448 = DSM 7271 = JCM 12966 = NCTC 12371. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGATATTAAATTTGATATAGACGCCCGCGAAGGTTTAAAACGTGGCGTTGAT GCATTAGCAAATGCAGTAAAAGTAACATTAGGCCCTCGTGGTCGTAATGTAATTATTAGC AAATCATTTGGTTCACCACAAGTAACCAAAGACGGGGTAACCGTTGCTAAGGAAATAGAA CTAGAAGACGCTCTCGAAAATATGGGCGCTCAAATGGTGAAAGAAGTAGCTTCTAAAACC AATGACCTCGCAGGCGATGGTACCACTACCGCTACTGTATTAGCACAAGCTATCGTAAAA GAAGGTCTTAAAAACGTAGCTTCTGGTGCTAACCCAATGGATTTAAAACGTGGTATTGAT AAAGCCGTAGCAAAAATCGTAGAACACTTGGCTAAACAAGCTAAAGAAGTAGGCTCTTCT TCTGAAAAAATCAAACAAGTAGCCTCTATCTCTGCTAACAACGACGATACTATTGGCGAA CTTATCGCTCAAGCATTCGAGAAAGTAGGTAAAGAAGGGGTTATCACCGTAGAAGAAGCA AAAGGTACAGATACTTACGTAGATGTAGTAGAAGGTATGCAGTTCGACCGCGGTTACCTT TCTCCTTACTTCGTAACCGATTCTGAAAAGATGGTTGCAGAACTCGACCACCCTTATATC TTGTTGTACGACAAGAAAATCTCTACTATGAAGGACTTGCTTCCTGTATTAGAGCCTGTA GCTCAATCTGGCAAACCTCTTTTGATTATCGCTGAAGATATCGATGGTGAAGCATTAGCT ACCTTAGTAGTAAACAAATTGCGCGGTACCCTTCGCATCGCTGCTGTAAAAGCTCCTGGT TTTGGTGACCGTCGTAAAGCAATGCTCGAAGATATCGCTATCCTTACTGGTGGTACTGTA ATTGCCGAAGAAAGAGGCTTTACCCTTGAAAACGCTACTATCGATATGCTTGGTACTGCC GAAAGAGTAAGTATCGACAAAGATAACACCACTATTGTAAATGGTGCTGGAAAATCTGAT AATATCAAAGCGCGTGTAGCACAAATCAAAGCACAAATCGAAAACACCTCTTCTGATTAT GACCGTGAAAAACTACAAGAGCGTTTAGCTAAACTCTCTGGTGGGGTAGCAGTGCTTTAC ATAGGTGCTGCTTCGGAAGTGGAAATGAAAGAGAAAAAAGACCGTGTAGATGATGCCCTT CACGCTACTCGTGCAGCTGTTGAAGAAGGTATCGTAGCAGGAGGTGGTATAGCGCTTATT CGTGCTAAAAATGTTTTAGGAAAACTAAAACCTCTCAATGCCGACGAAGAAACAGGTATT AAAATTATCCTCAAAGCATTGGAAGCTCCTTTGCGCACTATCGTAGAAAACGCAGGTGTT GAAGGTTCTGTAATCGTAGCTCGTGTACTCGAGGCTTCAAGAGATGCTTACGGATACAAT GCCAAAACAGGTACTTATACCGATATGTTTAAAGCAGGTATCATCGACCCTAAAAAGGTA ACCCGTGTAGCCCTTGAAAATGCTGCCTCAGTAGCTGGTATGATTCTCACTACCGAATGT GCTTTGGTAGACATCAAAGACGATAAAGCAGCTGCAATGCCTCCAATGGGTGGTGGAATG CCAGGAATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKFDIDAREGLKRGVDALANAVKVTLGPRGRNVIISKSFGSPQVTKDGVTVAKEIE LEDALENMGAQMVKEVASKTNDLAGDGTTTATVLAQAIVKEGLKNVASGANPMDLKRGID KAVAKIVEHLAKQAKEVGSSSEKIKQVASISANNDDTIGELIAQAFEKVGKEGVITVEEA KGTDTYVDVVEGMQFDRGYLSPYFVTDSEKMVAELDHPYILLYDKKISTMKDLLPVLEPV AQSGKPLLIIAEDIDGEALATLVVNKLRGTLRIAAVKAPGFGDRRKAMLEDIAILTGGTV IAEERGFTLENATIDMLGTAERVSIDKDNTTIVNGAGKSDNIKARVAQIKAQIENTSSDY DREKLQERLAKLSGGVAVLYIGAASEVEMKEKKDRVDDALHATRAAVEEGIVAGGGIALI RAKNVLGKLKPLNADEETGIKIILKALEAPLRTIVENAGVEGSVIVARVLEASRDAYGYN AKTGTYTDMFKAGIIDPKKVTRVALENAASVAGMILTTECALVDIKDDKAAAMPPMGGGM PGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACTGTATTAGCACAAGCTATCGTAAAAGAAGGTCTTAAAAACGTAGCTTCTGGTGCT AACCCAATGGATTTAAAACGTGGTATTGATAAAGCCGTAGCAAAAATCGTAGAACACTTG GCTAAACAAGCTAAAGAAGTAGGCTCTTCTTCTGAAAAAATCAAACAAGTAGCCTCTATC TCTGCTAACAACGACGATACTATTGGCGAACTTATCGCTCAAGCATTCGAGAAAGTAGGT AAAGAAGGGGTTATCACCGTAGAAGAAGCAAAAGGTACAGATACTTACGTAGATGTAGTA GAAGGTATGCAGTTCGACCGCGGTTACCTTTCTCCTTACTTCGTAACCGATTCTGAAAAG ATGGTTGCAGAACTCGACCACCCTTATATCTTGTTGTACGACAAGAAAATCTCTACTATG AAGGACTTGCTTCCTGTATTAGAGCCTGTAGCTCAATCTGGCAAACCTCTTTTGATTATC GCTGAAGATATCGATGGTGAAGCATTAGCTACCTTAGTAGTAAACAAATTGCGCGGTACC CTTCGCATCGCTGCTGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVKEGLKNVASGANPMDLKRGIDKAVAKIVEHLAKQAKEVGSSSEKIKQVASI SANNDDTIGELIAQAFEKVGKEGVITVEEAKGTDTYVDVVEGMQFDRGYLSPYFVTDSEK MVAELDHPYILLYDKKISTMKDLLPVLEPVAQSGKPLLIIAEDIDGEALATLVVNKLRGT LRIAAV |