RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b11977 |
Chaperonin Group: | I |
Deposit Date: | 2008-04-13 |
Type: | ref |
Type strain?: | yes |
Genus: | Opitutus |
Species: | terrae |
Strain: | PB90-1 |
Lineage: | root; cellular organisms; Bacteria; Chlamydiae/Verrucomicrobia group; Verrucomicrobia; Opitutae; Opitutales; Opitutaceae; Opitutus |
Original ID: | DSM 11246 |
CUTC ID: | - |
Nucleotide Genbank Accession: | CP001032 |
Peptide Genbank Accession: | ACB74515 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | From whole genome sequence. This organism was isolated from rice paddy soil and has been detected in peat bog soil and other anoxic terrestrial environments. Type strain synonyms PB90-1 = DSM 11246. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGCCCGCTAAACAAATCCTTTTCGACGAGACCGCACGTCGCGGCCTTCTCCGCGGAATC GAACAGCTCGCCCGCGCCGTCCGGGTCACGCTGGGTCCGCGCGGTCGCACCGTGGTCATC GACAAAAACTTCGGGGCCCCGACCGTCACCAAGGACGGCGTGACCGTCGCCAACGAGATC GAGCTACCCGACGCGTGCGAAAACGTCGGCGCCCAGATGGTGAAGGAAGTCGCCGCGAAA ACGTCCGAGGTCGCCGGCGATGGTACCACGACGGCGACCGTGCTGGCCGAAGCGATCTAC AAGGAGGGGCTGAAGAGCGTCACCGCCGGTTCCAATCCCATCTTTCTCAAACGGGGCATC GATCTCGCCGTCGAAGCCGCTGTCGCCGAGCTGGCGCGGATTGCGAAGAAGGTGAGCGAC CGCGAGGAGATTCGCCAGGTCGCCAGCATCTCCGCCAACACGGACGAGACCGTCGGCAAC ATCATTGCGGACGCGATGGACAAGGTCGGGAAGGACGGCACCATCACGGTCGAAGAAGGC AAATCGATCGAGACCACGCTCGAGGTGGTCGAGGGGATGCAATTCGACAAGGGCTATCTG TCCGCCTACTTCGCCACCGATCCGGACACGATGGAAGCGGTGCTGGAGGATGCCTATGTT CTCGCCCACGAGAAGAAGATCACCCACCTCCAGGATCTGTTGCCGCTGCTCCAGGCCGTG GCGAAAACCGGCCGTCCTTTGCTGATCATCGCCGAAGACGTGGAGGGCGAAGCGCTCTCG ACGCTCGTGATCAACCGCATGCGCGGCAGCCTCAAGGTGTGCGCCGTGAAAGCGCCCGGC TTCGGCGACCGCCGCCGCGCGATGCTGGAAGACATTGCCATCGTCACAGGCGGCCAATGC ATCACCGAAGAACTCGGACTGCGGCTCGCCGACCTGACCCTCGCCGGCTTGGGCCGCGCC AAGCGGATCGTCGTCACCAAGGACGACACCACCATCCTGTCGGGCGGCGGGAAGACCGCC GGAGTCCGCGCCCGCCTGAAACAGCTCCGCCGGGAAATCGAGGAGACGACGTCTGACTAC GAGCGGGAGAAGCTGCAGGAACGGCTCGCCAAGCTTGCCGGTGGCATCGCCGTGATTCAG GTCGGCGCGTCGACGGAGCTTGAAATGAAAGAGAAGAAAGCGCGGGTCGAGGACGCCCTG CATGCCACGCGGGCCGCCGTCAAAGAGGGCATTGTTCCCGGGGGTGGAGTCGCGCTGCTG CGATGCGCGAACGCAATCCAGGCGCTGAAGCTCCAGGGCGACGAAGCGGTCGGTGCGCAG ATTGTCCGCCGCGCGGCAGAGTCGCCCATCCGCATGCTGTGCGCCAACGCGGGCATGGAA GGTGCGGTGGTCGCGGCGAAAGTTGCCGCGGGCTCGGGCAGCTTCGGCTACAACGTCGCG ACGGGGGCCTACGAGGATCTGGTCCACGCCGGCGTAGTTGATCCTACGATGGTCACGCGC CTGGCGCTGCAGAACGCCGCATCGATCGCCGGCCTGCTGCTCACCATTGAATGCATGATC ACTGAGCTACCTGCTGACTCGCACGCAGGGGTTGGCCTCGCGGTGGGAGGTTCGCGCCCG TGA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MPAKQILFDETARRGLLRGIEQLARAVRVTLGPRGRTVVIDKNFGAPTVTKDGVTVANEI ELPDACENVGAQMVKEVAAKTSEVAGDGTTTATVLAEAIYKEGLKSVTAGSNPIFLKRGI DLAVEAAVAELARIAKKVSDREEIRQVASISANTDETVGNIIADAMDKVGKDGTITVEEG KSIETTLEVVEGMQFDKGYLSAYFATDPDTMEAVLEDAYVLAHEKKITHLQDLLPLLQAV AKTGRPLLIIAEDVEGEALSTLVINRMRGSLKVCAVKAPGFGDRRRAMLEDIAIVTGGQC ITEELGLRLADLTLAGLGRAKRIVVTKDDTTILSGGGKTAGVRARLKQLRREIEETTSDY EREKLQERLAKLAGGIAVIQVGASTELEMKEKKARVEDALHATRAAVKEGIVPGGGVALL RCANAIQALKLQGDEAVGAQIVRRAAESPIRMLCANAGMEGAVVAAKVAAGSGSFGYNVA TGAYEDLVHAGVVDPTMVTRLALQNAASIAGLLLTIECMITELPADSHAGVGLAVGGSRP |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACCGTGCTGGCCGAAGCGATCTACAAGGAGGGGCTGAAGAGCGTCACCGCCGGTTCC AATCCCATCTTTCTCAAACGGGGCATCGATCTCGCCGTCGAAGCCGCTGTCGCCGAGCTG GCGCGGATTGCGAAGAAGGTGAGCGACCGCGAGGAGATTCGCCAGGTCGCCAGCATCTCC GCCAACACGGACGAGACCGTCGGCAACATCATTGCGGACGCGATGGACAAGGTCGGGAAG GACGGCACCATCACGGTCGAAGAAGGCAAATCGATCGAGACCACGCTCGAGGTGGTCGAG GGGATGCAATTCGACAAGGGCTATCTGTCCGCCTACTTCGCCACCGATCCGGACACGATG GAAGCGGTGCTGGAGGATGCCTATGTTCTCGCCCACGAGAAGAAGATCACCCACCTCCAG GATCTGTTGCCGCTGCTCCAGGCCGTGGCGAAAACCGGCCGTCCTTTGCTGATCATCGCC GAAGACGTGGAGGGCGAAGCGCTCTCGACGCTCGTGATCAACCGCATGCGCGGCAGCCTC AAGGTGTGCGCCGTG |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAEAIYKEGLKSVTAGSNPIFLKRGIDLAVEAAVAELARIAKKVSDREEIRQVASIS ANTDETVGNIIADAMDKVGKDGTITVEEGKSIETTLEVVEGMQFDKGYLSAYFATDPDTM EAVLEDAYVLAHEKKITHLQDLLPLLQAVAKTGRPLLIIAEDVEGEALSTLVINRMRGSL KVCAV |