RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10913 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-03-02 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Paenibacillus |
| Species: | sp. |
| Strain: | JDR-2 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP001656 |
| Peptide Genbank Accession: | ACS99730 |
| Best FASTA Match: | b30498 Paenibacillus catalpae CGMCC 1.10784 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 93.700 |
| Best BLASTP Match: | b34558 Paenibacillus glycanilyticus NBRC 16618 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 97.826 |
| Source: | Genbank |
| Notes: | Paenibacillus sp. JDR-2 was isolated from sweet gum stem wood buried in surface soil. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGGAAATTAAATTTAGCGAAGACGCTCGCCGCGCAATGCTGCGCGGTGTTGAT CAACTTGCAAATGCGGTTAAAGTAACGCTTGGTCCTAAAGGCCGCAACGTGGTACTGGAG AAGAAATTCGGCAGCCCGCTCATCACTAACGACGGTGTTTCCATCGCGAAAGAAATCGAG CTGGAAGACGCATTCGAGAACATGGGTGCTCAACTGGTTAAAGAAGTAGCAACAAAAACT AACGACGTTGCCGGTGACGGTACAACTACTGCAACCGTTCTGGCTCAAGCGATGATTCGC GAAGGTCTGAAGAACGTTACCGCAGGCGCTAACCCTATGGTTATCCGCAAAGGTATCGAA AAAGCGGTTAAAGCCGCTATTGAAGAGCTGAAAGTAATCGCTAAGCCTATCGAAGGCAAG CAATCGATCGCGCAAGTTGCATCGATCTCCTCTGCTGACGAAGAAGTTGGCCAACTGATC GCTGAAGCGATGGAAAAAGTGGGCAACGACGGCGTTATCACGGTTGAAGAATCGAAAGGC TTCGTAACGGAGCTTGAAGTGGTTGAAGGCATGCAATTCGACCGCGGTTACGTTTCCCCA TACATGATCACTGATACAGATAAAATGGAAGCTGTCCTCGACAATCCATACATTCTGATC ACTGACAAAAAAATCTCCAACATTCAAGAGATCCTTCCGGTTCTCGAGAAAGTTGTTCAA TCCGGCAAGCAGCTTCTGATCATCGCTGAAGATATCGAAGGCGAAGCTCAAGCTACGCTC GTACTGAACAAACTGCGCGGTACATTCACTTGCGTAGGCGTTAAAGCTCCAGGCTTCGGC GACCGCCGTAAAGCAATGCTGGCTGATATCGCTGCTCTGACTGGCGCTCAAGTAGTAACA GAAGAGCTCGGCCTTGAACTGAAATCGGCATCCGTGGACCAACTTGGTTCCGCTCGCCAA ATTCGCATTACAAAAGAAAACACGATCATCGTTGACGGCAGCGGCAACCCTGACGACATC CAAGCTCGTGTTAACCAAATCCGCGTGCAACTGGAAGAAACAACTTCCGAGTTCGACCGT GAGAAACTGCAAGAGCGCCTGGCTAAACTGGCTGGCGGCGTAGCGGTTATCAAAGTCGGC GCGGCTACTGAAACCGAACTGAAAGAGCGTAAGCTTCGCATCGAAGACGCCCTGAACTCG ACTCGCGCAGCGGTTGAAGAAGGTATCGTATCCGGTGGTGGTACAGCTCTGATCAACGTA TACAAAGCTGTTGCAGCTGTTCAAACAACGGGCGACGAGCAAACAGGCGTTAACATCGTA TTGCGCTCCCTCGAAGAGCCGCTTCGCACAATCGCTGCGAACGCTGGCCAAGAAGGCTCC GTAATCGTTGAGCGTCTGAAAAACGAAAAAGTTGGCGTTGGTTACAATGCCGCTACTGGC GAATGGGTGAACATGTTCGAGGCGGGTATCGTTGACCCTGCTAAAGTAACTCGTTCCGCT CTGCAAAACGCAGCTTCCGTAGCAGCTATGTTCCTGACAACTGAAGCAGTAGTTGCCGAC AAACCTGAGCCGAAGGGCGCAGGCGCTGGCATGCCAGATATGGGCGGCATGGGCGGTATG GGCGGCATGATGTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKEIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFGSPLITNDGVSIAKEIE LEDAFENMGAQLVKEVATKTNDVAGDGTTTATVLAQAMIREGLKNVTAGANPMVIRKGIE KAVKAAIEELKVIAKPIEGKQSIAQVASISSADEEVGQLIAEAMEKVGNDGVITVEESKG FVTELEVVEGMQFDRGYVSPYMITDTDKMEAVLDNPYILITDKKISNIQEILPVLEKVVQ SGKQLLIIAEDIEGEAQATLVLNKLRGTFTCVGVKAPGFGDRRKAMLADIAALTGAQVVT EELGLELKSASVDQLGSARQIRITKENTIIVDGSGNPDDIQARVNQIRVQLEETTSEFDR EKLQERLAKLAGGVAVIKVGAATETELKERKLRIEDALNSTRAAVEEGIVSGGGTALINV YKAVAAVQTTGDEQTGVNIVLRSLEEPLRTIAANAGQEGSVIVERLKNEKVGVGYNAATG EWVNMFEAGIVDPAKVTRSALQNAASVAAMFLTTEAVVADKPEPKGAGAGMPDMGGMGGM GGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTTCTGGCTCAAGCGATGATTCGCGAAGGTCTGAAGAACGTTACCGCAGGCGCT AACCCTATGGTTATCCGCAAAGGTATCGAAAAAGCGGTTAAAGCCGCTATTGAAGAGCTG AAAGTAATCGCTAAGCCTATCGAAGGCAAGCAATCGATCGCGCAAGTTGCATCGATCTCC TCTGCTGACGAAGAAGTTGGCCAACTGATCGCTGAAGCGATGGAAAAAGTGGGCAACGAC GGCGTTATCACGGTTGAAGAATCGAAAGGCTTCGTAACGGAGCTTGAAGTGGTTGAAGGC ATGCAATTCGACCGCGGTTACGTTTCCCCATACATGATCACTGATACAGATAAAATGGAA GCTGTCCTCGACAATCCATACATTCTGATCACTGACAAAAAAATCTCCAACATTCAAGAG ATCCTTCCGGTTCTCGAGAAAGTTGTTCAATCCGGCAAGCAGCTTCTGATCATCGCTGAA GATATCGAAGGCGAAGCTCAAGCTACGCTCGTACTGAACAAACTGCGCGGTACATTCACT TGCGTAGGCGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMIREGLKNVTAGANPMVIRKGIEKAVKAAIEELKVIAKPIEGKQSIAQVASIS SADEEVGQLIAEAMEKVGNDGVITVEESKGFVTELEVVEGMQFDRGYVSPYMITDTDKME AVLDNPYILITDKKISNIQEILPVLEKVVQSGKQLLIIAEDIEGEAQATLVLNKLRGTFT CVGV |