RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close WindowChaperonin ID: | b10126 |
Chaperonin Group: | I |
Deposit Date: | 2007-04-23 |
Type: | ref |
Type strain?: | no |
Genus: | Haemophilus |
Species: | influenzae |
Strain: | 3655 |
Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Pasteurellales; Pasteurellaceae; Haemophilus |
Original ID: | - |
CUTC ID: | - |
Nucleotide Genbank Accession: | AAZF01000007 |
Peptide Genbank Accession: | EDJ92482 |
Best FASTA Match: | - |
Date of FASTA search: | - |
FASTA identity %: | - |
Best BLASTP Match: | - |
Date of BLASTP search: | - |
BLASTP identity %: | - |
Source: | Genbank |
Notes: | Strain 3655 is a non-typeable Haemophilus influenzae (NTHi) isolate obtained from the middle ear effusion of a child in Missouri with acute otitis media (AOM). Sequence is from whole genome shotgun sequence. |
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTAAAATTTGGTAATGACGCACGCGTAAAAATGCTTAAAGGCGTG AATGTATTAGCAGATGCAGTAAAAGTAACCCTTGGCCCGAAAGGTCGTAATGTAATTTTA GACAAATCATTTGGCGCACCAACTATCACTAAAGACGGTGTATCTGTTGCTCGTGAAATC GAATTAGAAGATAAATTCGAAAATATGGGCGCACAAATGGTAAAAGAAGTAGCATCTAAA GCAAATGATGCTGCAGGCGATGGTACAACCACTGCAACTGTGCTTGCGCAAGCTATCGTA AATGAAGGCTTGAAAGCAGTAGCGGCAGGTATGAACCCAATGGATTTAAAACGTGGTATT GATAAAGCAGTAAGTGCGGTTGTTTCTGAACTTAAAAATTTATCTAAACCTTGTGAAACA GCAAAAGAAATTGAACAAGTAGGGACTATTTCTGCAAACTCTGACAGCATTGTGGGTCAA TTAATCTCGCAAGCGATGGAAAAAGTGGGTAAAGAAGGCGTGATTACCGTTGAAGATGGT ACGGGTCTTGAAGATGAATTAGATGTGGTTGAAGGGATGCAATTCGATCGTGGTTACCTT TCTCCATATTTCATCAACAAACCAGAAACTGCAACGGTTGAATTAGATAATCCATATCTT CTTCTTGTAGATAAAAAAATCTCTAACATTCGCGAATTACTTCCGGTGTTAGAAGGCGTT GCGAAAGCAGGTAAACCATTATTAATCATCGCTGAAGATGTGGAAGGCGAAGCACTTGCA ACCTTAGTAGTGAACACGATGCGTGGTATCGTGAAAGTGGCAGCAGTGAAAGCACCAGGC TTTGGAGATCGTCGTAAAGCAATGTTACAAGATATTGCGATCTTAACTGCGGGTACAGTG ATTTCTGAAGAAATCGGTATGGAATTAGAAAAAGCGACACTTGAAGATCTTGGTCAAGCA AAACGTATTGTTATCAATAAAGATAACACAACCATTATTGACGGTGTCGGCGATGAATCT CAAATCAAAGGTCGTGTGGCTCAAATTCGCCAACAAATTGAAGAATCAACTTCTGACTAC GACAAAGAAAAACTTCAAGAACGCGTGGCTAAACTAGCTGGCGGTGTGGCTGTAATCAAA GTAGGCGCAGCAACTGAAGTTGAAATGAAAGAGAAAAAAGATCGTGTAGATGATGCGTTA CACGCAACTCGTGCCGCGGTTGAAGAAGGTATCGTTGCTGGTGGTGGTGTTGCATTAGTT CGCGCAGCAGCGAAAGTTGCAGCAAACCTAAAAGGTGATAACGAAGAACAAAATGTAGGT ATCAAACTTGCATTACGTGCAATGGAAGCACCTTTACGTCAAATCGTCACTAACTCAGGC GAAGAAGCATCTGTTGTGGCAAGTGCGGTTAAAAATGGCGAAGGAAACTTTGGTTATAAC GCAGGTACAGAACAATACGGCGATATGATCGAAATGGGTATCTTAGATCCAACTAAAGTA ACTCGCTCTGCATTACAATTCGCGGCATCCGTAGCAGGCTTAATGATTACCACTGAATGT ATGGTAACTGATCTGCCAAAAGATGATAAAGCCGATTTAGGTGCTGCTGGAATGGGCGGT ATGGGTGGAATGGGCGGAATGATGTAA |
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLKGVNVLADAVKVTLGPKGRNVILDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIVNEGLKAVAAGMNPMDLKRGI DKAVSAVVSELKNLSKPCETAKEIEQVGTISANSDSIVGQLISQAMEKVGKEGVITVEDG TGLEDELDVVEGMQFDRGYLSPYFINKPETATVELDNPYLLLVDKKISNIRELLPVLEGV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIAILTAGTV ISEEIGMELEKATLEDLGQAKRIVINKDNTTIIDGVGDESQIKGRVAQIRQQIEESTSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVDDALHATRAAVEEGIVAGGGVALV RAAAKVAANLKGDNEEQNVGIKLALRAMEAPLRQIVTNSGEEASVVASAVKNGEGNFGYN AGTEQYGDMIEMGILDPTKVTRSALQFAASVAGLMITTECMVTDLPKDDKADLGAAGMGG MGGMGGMM |
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTGCTTGCGCAAGCTATCGTAAATGAAGGCTTGAAAGCAGTAGCGGCAGGTATG AACCCAATGGATTTAAAACGTGGTATTGATAAAGCAGTAAGTGCGGTTGTTTCTGAACTT AAAAATTTATCTAAACCTTGTGAAACAGCAAAAGAAATTGAACAAGTAGGGACTATTTCT GCAAACTCTGACAGCATTGTGGGTCAATTAATCTCGCAAGCGATGGAAAAAGTGGGTAAA GAAGGCGTGATTACCGTTGAAGATGGTACGGGTCTTGAAGATGAATTAGATGTGGTTGAA GGGATGCAATTCGATCGTGGTTACCTTTCTCCATATTTCATCAACAAACCAGAAACTGCA ACGGTTGAATTAGATAATCCATATCTTCTTCTTGTAGATAAAAAAATCTCTAACATTCGC GAATTACTTCCGGTGTTAGAAGGCGTTGCGAAAGCAGGTAAACCATTATTAATCATCGCT GAAGATGTGGAAGGCGAAGCACTTGCAACCTTAGTAGTGAACACGATGCGTGGTATCGTG AAAGTGGCAGCAGTG |
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKAVAAGMNPMDLKRGIDKAVSAVVSELKNLSKPCETAKEIEQVGTIS ANSDSIVGQLISQAMEKVGKEGVITVEDGTGLEDELDVVEGMQFDRGYLSPYFINKPETA TVELDNPYLLLVDKKISNIRELLPVLEGVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |