RECORD DETAILS
Remove Record From Cart - Printer-friendly version - Close Window| Chaperonin ID: | b10044 |
| Chaperonin Group: | I |
| Deposit Date: | 2007-02-19 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Saccharophagus |
| Species: | degradans |
| Strain: | 2-40 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Saccharophagus |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP000282 |
| Peptide Genbank Accession: | ABD80146 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. Marine bacterium, degrade complex polysaccharides. Type strain synonyms strain 2-40 = ATCC 43961 = DSM 17024. |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCGAAAATTGTAAAGTTTGGTGACGAAGCCCGTCAAAAAATGTTGGCTGGTGTAAAT GTCTTGGCCGACGCTGTAAAAACTACCTTAGGCCCTAAAGGTCGCAACGTAGTATTAGAT AAGTCTTTTGGTGCACCGACTGTAACTAAAGATGGTGTATCTGTTGCGAAAGAAATCGAA TTAGAAGATAAATTCGAAAATATGGGCGCACAAATGGTTAAAGAAGTAGCCTCTAAAGCG TCTGACGATGCTGGTGACGGTACTACTACTGCAACCGTATTGGCTCAAGCCATTGTTAAC GAAGGCCTAAAGTCCGTTGCTGCTGGCATGAACCCAATGGATTTAAAGCGCGGTATCGAC AAAGCTGTTAACGCTGCTGTTGCTCACATCAAATCTATCGCGCAACCATGTGAAGATGGC AAGTCAATCGCTCAGGTTGGTACTATCTCTGCAAACAGCGATTCTCACGTTGGCGACATC ATTGCAGAAGCAATGGCCAAAGTGGGTAAAGAAGGCGTTATTACTGTAGAAGAAGGTAGC GGCTTAGAGAACGAATTGGACGTAGTAGAAGGTATGCAGTTTGACCGCGGTTACCTTTCT CCTTACTTCATCAACAACCAAGAAAGCATGAGCGTTGAAATTGAACAGCCATACATTCTG CTTGTTGATAAAAAAATCTCTAACATTCGCGAATTGTTACCAGTATTAGAAGCTGTTGCT AAGTCTGGCAAGCCATTGGTTATTGTTGCTGAAGACGTAGAAGGCGAAGCATTAGCTACT TTGGTTGTAAACAACATGCGCGGTATTGTTAAAGTGACTGCGTGTAAAGCACCTGGTTTT GGCGACCGTCGCAAAGCGATGTTGCAAGATATTGCAATCTTAACTGGTGGTACCGTAATT TCTGAAGAAGTGGGCTTAGATCTAGAAAGCGCTACTTTGGAGCACTTAGGTTCTGCTAAG CGTGTAACCATGACCAAAGAAAACAGCACTATCGTTGATGGCGCAGGCGTTGCTGCAGAT ATCGAATCTCGTGTTGCTCAAATTCGCGCGCAAATCGAAGAAACTTCTTCTGATTACGAT CGTGAAAAACTTCAAGAGCGTGTTGCTAAGCTTGCTGGCGGTGTTGCCGTTATTAAAGTT GGCGCCATGACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTAGAAGATGCGTTACAC GCAACACGCGCTGCGGTTGAAGAGGGTGTTGTACCTGGAGGCGGTACTGCGCTTATCCGT GCAGCAGCGGCAATTGCCGACCTTAAAGGCGACAACGAAGACCAGAACGCTGGTATTGGT ATTGCTATCCGTGCTCTTGAAGCGCCATTGCGTCAAATCGTTTCTAACGCTGGCGGCGAA GCGTCTGTTGTTGCAGATAAAGTTAAAAACGGCGAAGGCAACTTCGGCTTTAACGCGGCA TCTGGCGAATACGGCGATATGCTTGAGTTTGGTATTCTTGACCCAGCTAAAGTTTCGCGC ACTGCCATTCAAGCTGCAGGCTCAATTGCCGGCTTGATGATCACCACCGAAGCAATGATT GCTGACAAGCCTTCTGAAGGCGGCGCTGCTGCACCAGACATGGGTGGCATGGGTGGAATG GGCGGCATGGGCGGCATGATGTAA |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIVKFGDEARQKMLAGVNVLADAVKTTLGPKGRNVVLDKSFGAPTVTKDGVSVAKEIE LEDKFENMGAQMVKEVASKASDDAGDGTTTATVLAQAIVNEGLKSVAAGMNPMDLKRGID KAVNAAVAHIKSIAQPCEDGKSIAQVGTISANSDSHVGDIIAEAMAKVGKEGVITVEEGS GLENELDVVEGMQFDRGYLSPYFINNQESMSVEIEQPYILLVDKKISNIRELLPVLEAVA KSGKPLVIVAEDVEGEALATLVVNNMRGIVKVTACKAPGFGDRRKAMLQDIAILTGGTVI SEEVGLDLESATLEHLGSAKRVTMTKENSTIVDGAGVAADIESRVAQIRAQIEETSSDYD REKLQERVAKLAGGVAVIKVGAMTEVEMKEKKARVEDALHATRAAVEEGVVPGGGTALIR AAAAIADLKGDNEDQNAGIGIAIRALEAPLRQIVSNAGGEASVVADKVKNGEGNFGFNAA SGEYGDMLEFGILDPAKVSRTAIQAAGSIAGLMITTEAMIADKPSEGGAAAPDMGGMGGM GGMGGMM |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTATTGGCTCAAGCCATTGTTAACGAAGGCCTAAAGTCCGTTGCTGCTGGCATG AACCCAATGGATTTAAAGCGCGGTATCGACAAAGCTGTTAACGCTGCTGTTGCTCACATC AAATCTATCGCGCAACCATGTGAAGATGGCAAGTCAATCGCTCAGGTTGGTACTATCTCT GCAAACAGCGATTCTCACGTTGGCGACATCATTGCAGAAGCAATGGCCAAAGTGGGTAAA GAAGGCGTTATTACTGTAGAAGAAGGTAGCGGCTTAGAGAACGAATTGGACGTAGTAGAA GGTATGCAGTTTGACCGCGGTTACCTTTCTCCTTACTTCATCAACAACCAAGAAAGCATG AGCGTTGAAATTGAACAGCCATACATTCTGCTTGTTGATAAAAAAATCTCTAACATTCGC GAATTGTTACCAGTATTAGAAGCTGTTGCTAAGTCTGGCAAGCCATTGGTTATTGTTGCT GAAGACGTAGAAGGCGAAGCATTAGCTACTTTGGTTGTAAACAACATGCGCGGTATTGTT AAAGTGACTGCGTGT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVNEGLKSVAAGMNPMDLKRGIDKAVNAAVAHIKSIAQPCEDGKSIAQVGTIS ANSDSHVGDIIAEAMAKVGKEGVITVEEGSGLENELDVVEGMQFDRGYLSPYFINNQESM SVEIEQPYILLVDKKISNIRELLPVLEAVAKSGKPLVIVAEDVEGEALATLVVNNMRGIV KVTAC |