RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b28002 |
| Chaperonin Group: | I |
| Deposit Date: | 2016-05-20 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Leifsonia |
| Species: | xyli |
| Strain: | subsp. cynodontis DSM 46306 |
| Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Actinobacteria; Micrococcales; Microbacteriaceae; Leifsonia; Leifsonia xyli; Leifsonia xyli subsp. cynodontis |
| Original ID: | ATCC 33973 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_022438 |
| Peptide Genbank Accession: | WP_021754291 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms Bermudagrass TB1A = CIP 104615 = ICMP 8790 = JCM 9733 = LMG 7552 = NCIB (now NCIMB) 11927 = VKM Ac-2041 |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAGATCATTGCTTTCGACGAGGATGCCCGTCGCGGCCTCGAGCGCGGCCTCAAC ATCCTGGCTGACACCGTCAAGGTGACGCTTGGCCCGCGCGGGCGCAACGTCGTCCTCGAG AAGAAGTGGGGAGCGCCGACCATCACCAACGACGGCGTCTCCATCGCGAAGGAGATCGAA CTCGACGACCCGTACGAGAAGATCGGCGCGGAGCTCGTCAAAGAGGTCGCGAAGAAGACC GACGATGTCGCCGGCGACGGGACCACCACGGCCACCGTGCTCGCCCAGGCGCTCGTCAAG GAAGGTCTGCGCAACGTCGCGGCCGGCGCCGACCCGATCTCGCTGAAGCGCGGCATCGAG AAGGCCGTCGAGGCCGTCACCGCCGAACTGGTCGGCAGTTCCAAGGAGGTCGAGAGCAAG AAGGAGGTCGCGGCCACCGCCTCCATCTCCGCCGGGGACACCACCATCGGCGACATCATC GCCGAGGCGATCGACAAGGTCGGCAAGGAGGGCGTCGTCACCGTCGAGGAGTCGAACACC TTCGGCACCGAGCTGGAGCTGACCGAGGGCATGCGCTTCGACAAGGGCTTCCTGTCGCAG TACTTCGTCACCGACCAGGACCGCCAGGAGGCGGTGTTCGAGGACGCGTACATCCTCATC GCCAACCAGAAGATCTCCTCGATCAAAGACCTGCTCCCGATCGTGGACAAGGTCATCCAG GCCAACAAGCAGCTCCTCATCATCGCTGAGGACGTCGACGGCGAGGCGCTCGCTACCTTG ATCGTCAACAAGATCCGCGGCATCTTCAAGTCCGTCGCCGTCAAGGCTCCGGGCTTCGGC GACCGCCGCAAGGCCATGTTGCAGGACATCGCGATCCTCACCGGCGGCCAGGTCATCTCC GAGGAGGTCGGTCTCAAGCTCGAGAACGTCACCCTCGACCTGCTCGGCCAGGCCCGCAAG GTCGTCATCACCAAGGATGAGACCACCATCGTCGAGGGCGCGGGGGACACCGAGCAGATC GCCGGTCGCGTGGCCCAGATCCGCGGCGAGATCGACAACACCGACTCGGACTACGACCGC GAGAAGCTCCAGGAGCGTCTCGCCAAGCTCGCTGGCGGCGTTGCCGTGATCAAGGCGGGC GCGGCCACCGAGGTCGAGCTCAAGGAGCGCAAGCACCGCATCGAGGACGCCGTCCGCAAC GCGAAGGCGGCCGTCGAGGAGGGCATCGTGGCCGGTGGGGGCGTCGCCCTCATCCAGGCC GGCAAGCTCGCGTTCGAGAAGCTGAAGCTCGAGGGCGACGAGGCCACCGGCGCCAACATC GTCAAGGTCGCCATCGAAGCCCCGATGAAGCAGATCGCGATCAACGCAGGCATGGAGCCG GGCGTTGTCGTCGCCCGTGTCCGCGAGCTCCCGCTCGGCCACGGTCTCAACGCGGCCACC GGCGACTACGTCGACATGATCATCGCGGGCATCAACGACCCGGTGAAGGTCACCCGCTCG GCGCTGCAGAACGCCGCTTCCATCGCGGGTCTGTTCCTCACCACCGAGGCCGTCGTGGCC GACAAGCCGGAGAAGGCCGCCCCTGTCGCGGCCGACCCGGGTGCGGGCATGGACTTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKIIAFDEDARRGLERGLNILADTVKVTLGPRGRNVVLEKKWGAPTITNDGVSIAKEIE LDDPYEKIGAELVKEVAKKTDDVAGDGTTTATVLAQALVKEGLRNVAAGADPISLKRGIE KAVEAVTAELVGSSKEVESKKEVAATASISAGDTTIGDIIAEAIDKVGKEGVVTVEESNT FGTELELTEGMRFDKGFLSQYFVTDQDRQEAVFEDAYILIANQKISSIKDLLPIVDKVIQ ANKQLLIIAEDVDGEALATLIVNKIRGIFKSVAVKAPGFGDRRKAMLQDIAILTGGQVIS EEVGLKLENVTLDLLGQARKVVITKDETTIVEGAGDTEQIAGRVAQIRGEIDNTDSDYDR EKLQERLAKLAGGVAVIKAGAATEVELKERKHRIEDAVRNAKAAVEEGIVAGGGVALIQA GKLAFEKLKLEGDEATGANIVKVAIEAPMKQIAINAGMEPGVVVARVRELPLGHGLNAAT GDYVDMIIAGINDPVKVTRSALQNAASIAGLFLTTEAVVADKPEKAAPVAADPGAGMDF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTCGCCCAGGCGCTCGTCAAGGAAGGTCTGCGCAACGTCGCGGCCGGCGCC GACCCGATCTCGCTGAAGCGCGGCATCGAGAAGGCCGTCGAGGCCGTCACCGCCGAACTG GTCGGCAGTTCCAAGGAGGTCGAGAGCAAGAAGGAGGTCGCGGCCACCGCCTCCATCTCC GCCGGGGACACCACCATCGGCGACATCATCGCCGAGGCGATCGACAAGGTCGGCAAGGAG GGCGTCGTCACCGTCGAGGAGTCGAACACCTTCGGCACCGAGCTGGAGCTGACCGAGGGC ATGCGCTTCGACAAGGGCTTCCTGTCGCAGTACTTCGTCACCGACCAGGACCGCCAGGAG GCGGTGTTCGAGGACGCGTACATCCTCATCGCCAACCAGAAGATCTCCTCGATCAAAGAC CTGCTCCCGATCGTGGACAAGGTCATCCAGGCCAACAAGCAGCTCCTCATCATCGCTGAG GACGTCGACGGCGAGGCGCTCGCTACCTTGATCGTCAACAAGATCCGCGGCATCTTCAAG TCCGTCGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALVKEGLRNVAAGADPISLKRGIEKAVEAVTAELVGSSKEVESKKEVAATASIS AGDTTIGDIIAEAIDKVGKEGVVTVEESNTFGTELELTEGMRFDKGFLSQYFVTDQDRQE AVFEDAYILIANQKISSIKDLLPIVDKVIQANKQLLIIAEDVDGEALATLIVNKIRGIFK SVAV |