RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b14487 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-08-13 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Sideroxydans |
| Species: | lithotrophicus |
| Strain: | ES-1 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Sideroxydans |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013959 |
| Peptide Genbank Accession: | YP_003522816 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | This is an iron-oxidizing freshwater bacterium isolated from iron contaminated groundwater in Michigan.Name has no standing in nomenclature as of 2009-08-13. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTGAAATTCCATGATGCAGCACGTGCCAAGATGGTCGTGGGCGTC AACATTCTGGCCGATGCGGTCAAGGTGACTCTGGGTCCGAAAGGCCGTAACGTGGTGCTG GACCGTTCCTACGGTTCTCCCACCATCACCAAGGACGGAGTATCCGTCGCCAAGGAGATC GAACTGAAGGACAAGTTCGAGAACATGGGCGCGCAAATGGTCAAGGAAGTCGCTTCCAAG ACCTCCGACGTGGCCGGTGACGGTACAACTACTGCGACTGTGCTGGCACAGTCCATCGTG CAGGAAGGCATGAAGTTCGTTGCCGCCGGCATGAACCCGATGGACCTGAAGCGCGGTATC GACCAGGCCGTGATCGCCGCTGTGGCAGAACTGAAGAAGATCTCCAAGCCTTGCACCACC ACCAAGGAAATCGCGCAAGTGGGCAGCATCTCCGCCAACTCCGATACCGTGATCGGCGAG AAGATCGCTGCTGCGATGGAAAAAGTGGGCAAGGAAGGTGTCATCACCATTGAAGACGGT CAGGGTCTGGAAGACGAACTGGACATCGTGGAAGGTATGCAATTCGACCGCGGCTACCTG TCTCCCTACTTCATCAACAACGCCGACAAGCAGATCGCCGCGATGGAGAACCCCTTCATC CTGTTGCATGACAAGAAGATCTCCAACATTCGTGACCTGCTGCCCCTGCTGGAACAGGTC GCCAAGGCCGGTCGTCCGTTGCTGATCATCGCCGAAGATGTGGACGGCGAAGCACTGGCA ACCCTGGTGGTGAACAACATCCGCGGCATCCTGAAGACGGTTGCCGTCAAGGCGCCCGGC TTCGGTGATCGTCGCAAGGCGATGCTGGAAGACATCGCCGTCCTGACCGGCGGTACCGTG ATCGCTGAAGAAGTCGGCCTGTCTCTGGAAAAGGCGACACTGGCTGAAATGGGTCAAGCC AAGCGCATCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGTGCAGGCAAGCACGAA GCGATCCTGGGTCGCGTTGGCGAGATCAAGAAGCTGGCTGAAGAATCCACCAGCGACTAC GACAAGGAAAAACTGCAAGAACGTCTCGCCAAGCTGTCTGGCGGTGTGGCAGTGATCAAG GTCGGTGCTGCGACCGAAGTCGAAATGAAGGAAAAGAAGGCGCGCGTGGAAGATGCATTG CACGCGACCCGTGCTGCGGTTGAAGAAGGCATCGTCCCCGGCGGCGGCGTAGCTTTGCTG CGTGCCAAGGCAGCGGTTGCCGGCCTGAAGGGTGCCAACCACGACCAGGACGCCGGTATC ACCATCGTGCTGCGCGCCATGGAATCGCCTATCCGTGCTATCACCATGAACGCAGGCGAC GAGCCCAGCGTTGTGGTGAACAAGGTGCTGGAAGGCAAGGGCAGCTTCGGTTACAACGCG TCCTCCAGCGAGTATGGCGACATGCTGGTCATGGGCGTGGTTGATCCGACCAAGGTAACG CGCGTTGCACTGCAAAATGCAGCTTCCATCGCCGGCCTGATGCTGACAACTGCTTGCATG GTGGCTGAATTGCCGGAAGACAAGCCAGCCGGCGGTATGGGTGGCGGGGATATGGGCGGC ATGGGTGGTATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFHDAARAKMVVGVNILADAVKVTLGPKGRNVVLDRSYGSPTITKDGVSVAKEI ELKDKFENMGAQMVKEVASKTSDVAGDGTTTATVLAQSIVQEGMKFVAAGMNPMDLKRGI DQAVIAAVAELKKISKPCTTTKEIAQVGSISANSDTVIGEKIAAAMEKVGKEGVITIEDG QGLEDELDIVEGMQFDRGYLSPYFINNADKQIAAMENPFILLHDKKISNIRDLLPLLEQV AKAGRPLLIIAEDVDGEALATLVVNNIRGILKTVAVKAPGFGDRRKAMLEDIAVLTGGTV IAEEVGLSLEKATLAEMGQAKRIEVGKENTTIIDGAGKHEAILGRVGEIKKLAEESTSDY DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVPGGGVALL RAKAAVAGLKGANHDQDAGITIVLRAMESPIRAITMNAGDEPSVVVNKVLEGKGSFGYNA SSSEYGDMLVMGVVDPTKVTRVALQNAASIAGLMLTTACMVAELPEDKPAGGMGGGDMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACTGTGCTGGCACAGTCCATCGTGCAGGAAGGCATGAAGTTCGTTGCCGCCGGCATG AACCCGATGGACCTGAAGCGCGGTATCGACCAGGCCGTGATCGCCGCTGTGGCAGAACTG AAGAAGATCTCCAAGCCTTGCACCACCACCAAGGAAATCGCGCAAGTGGGCAGCATCTCC GCCAACTCCGATACCGTGATCGGCGAGAAGATCGCTGCTGCGATGGAAAAAGTGGGCAAG GAAGGTGTCATCACCATTGAAGACGGTCAGGGTCTGGAAGACGAACTGGACATCGTGGAA GGTATGCAATTCGACCGCGGCTACCTGTCTCCCTACTTCATCAACAACGCCGACAAGCAG ATCGCCGCGATGGAGAACCCCTTCATCCTGTTGCATGACAAGAAGATCTCCAACATTCGT GACCTGCTGCCCCTGCTGGAACAGGTCGCCAAGGCCGGTCGTCCGTTGCTGATCATCGCC GAAGATGTGGACGGCGAAGCACTGGCAACCCTGGTGGTGAACAACATCCGCGGCATCCTG AAGACGGTTGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSIVQEGMKFVAAGMNPMDLKRGIDQAVIAAVAELKKISKPCTTTKEIAQVGSIS ANSDTVIGEKIAAAMEKVGKEGVITIEDGQGLEDELDIVEGMQFDRGYLSPYFINNADKQ IAAMENPFILLHDKKISNIRDLLPLLEQVAKAGRPLLIIAEDVDGEALATLVVNNIRGIL KTVAV |