RECORD DETAILS
For pacc NC_013440, see also: b13617
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b13616 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-04-27 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Haliangium |
| Species: | ochraceum |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; delta/epsilon subdivisions; Deltaproteobacteria; Myxococcales; Nannocystineae; Haliangiaceae; Haliangium |
| Original ID: | DSM 14365 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013440 |
| Peptide Genbank Accession: | YP_003269744 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms strain SMP-2 = AJ 13395 = DSM 14365 = JCM 11303. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCCAAAGAAATCGTATTTTCCACCCAGGCCCGCGCGGAGATCGCCAAGGGTCTG AACATGCTCGCCAACGCAGTGAAGGTCACGCTTGGGCCCCGCGGTCGCAACGTCGTGATC GAGAAGTCCTGGGGCGCCCCGACGGTGACCAAGGACGGCGTGACCGTGGCCAAAGAGGTC GAGGTCACCAACAAGCTCCAGAACATGGGCGCGCAGATGATGAAGGAGGTCGCTTCCAAG ACCTCCGACATCGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCGCAGGCCATCTTC ACCGAGGGCGCCAAGCTGGTCGCCGCCGGCGTCAACCCGATGGACCTCAAGCGCGGCATC GAGGCCGCGGTCGAGGAGATCGTCGACGAGCTGTCCAAGCTCTCGACCCCGACCAAGGGC AAGACCGACATCGCCCAGGTCGGCACCATCAGCGCCAACGGCGACTCGACCATCGGCGAC ATGATCGCCGAGGCCATGGAGAAGGTCGGCAAAGAGGGTGTGATCACGGTCGAGGAGTCC AAGACCATGCAGAGCGAGCTCGACGTGGTCGAGGGCATGCAGTTCGATCGCGGCTACCTC TCGCCGTACTTCGTGACCGACCCCGATCGCATGGAGGTCGTGCTCAACGACCCCTTCCTG CTCATCTGCGAGAAGAAGATCTCCAACATGAAGGATCTGCTTCCCGTGCTCGAGCAGGTG GCCAAGTCGGGCCGTCCGCTGCTCATCCTCGCCGAGGACGTCGATGGCGAGGCGCTGGCC ACCCTGGTGGTCAACAAGCTGCGCGGCACCCTGCAGGTGGCCGCGGTCAAGGCCCCGGGC TTCGGTGACCGCCGCAAGGCCATGCTCACCGACATCGCCACCCTCACCGGCGGTCAGGCC GTCACCGAGGACATCGGCGTCAAGCTCGACGGCGTGACCCTCCAGGAGCTGGGCCAGGCC AAGCGCGTTGTCATCACCAAGGACAACACCACCATCGTCGAGGGCGCGGGCGAGACCAGC GCCATCGAGGGCCGGGTCAAGCAGATCCGCCGCGAGGTCGAGGACACCACCAGCGACTAC GACCGCGAGAAGCTGCAGGAGCGCCTGGCCAAGCTGGTCGGCGGTGTCGCCGTCATCCGC GTGGGTGCGGCAACCGAGGTCGAGATGAAGGAGAAGAAGGCGCGCGTGGAAGACGCCATG CACGCCACCCGCGCGGCCGTCGAAGAGGGCATCGTCCCCGGCGGCGGTGTCGCTCTCATC CGCTCGGGCAGCCGTCTCGACAAGCTCACCTTCGACGACGACCGCCGCTTCGGCGTCAAC ATCGTGCGCCAGGCCATCGAGGCGCCGCTGCGCCAGATCTCGCACAACGCGGGCGTGGAC GGCTCGATCATCGTCTCCAAGGTGCGCGAGGGCGAGGGCAACTTCGGCTACAACGCCGCC ACCCTCGAGTACCAGGACCTGGTCGAGAACGGCGTCATCGACCCGACCAAGGTCGTGCGC TCGGCGCTGCAGAACGCGGCCTCGGTCGCCGGTCTGATGCTGACCACCGAGGCCCTCGTG GCCGAGAAGGTCAAGGACGAGGACGACGCCGGCTCTCACGACCACGGCGACTACTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEIVFSTQARAEIAKGLNMLANAVKVTLGPRGRNVVIEKSWGAPTVTKDGVTVAKEV EVTNKLQNMGAQMMKEVASKTSDIAGDGTTTATVLAQAIFTEGAKLVAAGVNPMDLKRGI EAAVEEIVDELSKLSTPTKGKTDIAQVGTISANGDSTIGDMIAEAMEKVGKEGVITVEES KTMQSELDVVEGMQFDRGYLSPYFVTDPDRMEVVLNDPFLLICEKKISNMKDLLPVLEQV AKSGRPLLILAEDVDGEALATLVVNKLRGTLQVAAVKAPGFGDRRKAMLTDIATLTGGQA VTEDIGVKLDGVTLQELGQAKRVVITKDNTTIVEGAGETSAIEGRVKQIRREVEDTTSDY DREKLQERLAKLVGGVAVIRVGAATEVEMKEKKARVEDAMHATRAAVEEGIVPGGGVALI RSGSRLDKLTFDDDRRFGVNIVRQAIEAPLRQISHNAGVDGSIIVSKVREGEGNFGYNAA TLEYQDLVENGVIDPTKVVRSALQNAASVAGLMLTTEALVAEKVKDEDDAGSHDHGDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCGCAGGCCATCTTCACCGAGGGCGCCAAGCTGGTCGCCGCCGGCGTC AACCCGATGGACCTCAAGCGCGGCATCGAGGCCGCGGTCGAGGAGATCGTCGACGAGCTG TCCAAGCTCTCGACCCCGACCAAGGGCAAGACCGACATCGCCCAGGTCGGCACCATCAGC GCCAACGGCGACTCGACCATCGGCGACATGATCGCCGAGGCCATGGAGAAGGTCGGCAAA GAGGGTGTGATCACGGTCGAGGAGTCCAAGACCATGCAGAGCGAGCTCGACGTGGTCGAG GGCATGCAGTTCGATCGCGGCTACCTCTCGCCGTACTTCGTGACCGACCCCGATCGCATG GAGGTCGTGCTCAACGACCCCTTCCTGCTCATCTGCGAGAAGAAGATCTCCAACATGAAG GATCTGCTTCCCGTGCTCGAGCAGGTGGCCAAGTCGGGCCGTCCGCTGCTCATCCTCGCC GAGGACGTCGATGGCGAGGCGCTGGCCACCCTGGTGGTCAACAAGCTGCGCGGCACCCTG CAGGTGGCCGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIFTEGAKLVAAGVNPMDLKRGIEAAVEEIVDELSKLSTPTKGKTDIAQVGTIS ANGDSTIGDMIAEAMEKVGKEGVITVEESKTMQSELDVVEGMQFDRGYLSPYFVTDPDRM EVVLNDPFLLICEKKISNMKDLLPVLEQVAKSGRPLLILAEDVDGEALATLVVNKLRGTL QVAAV |