RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b13606 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-04-27 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Lancefieldella |
| Species: | parvula |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Terrabacteria group; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Lancefieldella; Lancefieldella parvula |
| Original ID: | DSM 20469 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_013203 |
| Peptide Genbank Accession: | YP_003179211 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms strain IPP 1246 = ATCC 33793 = CCUG 32760 = CIP 102970 = DSM 20469 = JCM 10300 = VPI 0546. Formerly Atopobium parvula. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTAAAGATATCGATTTTGGCACCGACGCTCGTGCCAAGCTTGCTAAGGGCGTAAAC ACCCTGGCAGATGCCGTAACCACCACCCTTGGACCTAAGGGTCGCTACGTTGCACTGCAG CGTTCTTATGGTGCACCAACTATTACCAACGACGGCGTTTCCGTTGCTCGCGAGATTGAG CTTAAGGACCCAGTAGAGAACATGGGTGCACAGCTGGTCAAAGAGGTTGCAACCAAGACT AACGATACTGTCGGTGATGGTACCACCACCGCAACCTTGCTTGCACAGGTTATTGTTAAC GAGGGTCTTCGTAATGTTGCAGCTGGTGCAAATCCAATTGCAATTCGCCGCGGCATCGAC AAGGCTGTTGAGGCTGTTGTCTCCCAGATGAAGGGTATTGCTAAGGAGGTCTCAACCAAG CAGCAGATTGCTTCCGTTGGTACCATTTCTGCAGGTGACCCTGTCATTGGTGGCAAGATT TCAGATGCTATGGACGTTGTCGGCAAGGATGGCGTCATTACTGTTGAGGAGTCTCAGACC TTTGGTATTGACATCGACACCGTTGAGGGTATGCAGTTTGACAAGGGCTATGTTTCCCCT TACTTCGCAACCAACAACGAGACTCTCACCGCTGAGCTGGACAATCCTTACATTCTGATG ACCGATAGCAAGATCTCCTCCATCCAGGACATCCTGCCTATCCTTGAGGCTGTCCAGAAG CAGGGCGCACCTCTGCTCATCATGGCTGAGGACGTTGACGGCGAGGCTTTGACCACCCTC ATCCTTAACAAGCTTCGTGGCGTTCTGAACGTCTGCGCAATTAAGGCTCCTGCATACGGC GACCGTCGTAAGCGTATGCTTGAGGACATTGCTGTTCTCACTGGTGGTCAGGCAGTCATC AAGGAGCTCGGTGTTAACCTCAATGAGATTACCGCTGACATGCTCGGCCGCGCTAAGTCC GTCAAGGTTACCAAGGAGACCACTACCATCGTTGGTGGCGCTGGTTCCAAGGACGCAATT GACGAGCGTATTGCTCAGATTAAGGCTGAGATTGACAACACCACTTCTGACTTTGATCGC GAGAAGCTCCAGGAGCGTCTTGCTAAGCTTGCTGGCGGCGTTGCCGTTATCAAGGTTGGT GCAGCTACTGAGGTTGAGCTCAAGGAGATTAAGCACCGCATCGAGGACGCACTTCAGGCA ACTCGCGCAGCTGTCGAGGAGGGTATTGTTGCAGGCGGCGGCGTTTCCTTCCTGGCTGCA TCTTCTGTTTTGGATAGCGTTCAGACCTCTGATGCAGACGAGAAGATTGGTGTTGAAATC ATCCGTAAGGCACTTGAGGCTCCAGTTCGCACCATCGCTAACAATGCTGGTTTCGAGGGC AGCGTAGTTGTCGAGAAGATCAAGGCACTCCCAGCAGGTCAGGGTCTTGATTCTGCAACA GGTCAGTATGGCGACATGATTGAGATGGGCGTTCTTGACCCAGTTAAGGTCACCCGCACC ACGCTTCAGAATGCAGCTTCCGTTGCATCCCTCATCCTCATCACTGAGGCAACTGTTTCC GAGATGCCAAAGGACACCACCATCGAGGAGTCCATTTCTCGTGCAGCTGCTCAGGGCGGC CAGGGCGGCATGTACTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIDFGTDARAKLAKGVNTLADAVTTTLGPKGRYVALQRSYGAPTITNDGVSVAREIE LKDPVENMGAQLVKEVATKTNDTVGDGTTTATLLAQVIVNEGLRNVAAGANPIAIRRGID KAVEAVVSQMKGIAKEVSTKQQIASVGTISAGDPVIGGKISDAMDVVGKDGVITVEESQT FGIDIDTVEGMQFDKGYVSPYFATNNETLTAELDNPYILMTDSKISSIQDILPILEAVQK QGAPLLIMAEDVDGEALTTLILNKLRGVLNVCAIKAPAYGDRRKRMLEDIAVLTGGQAVI KELGVNLNEITADMLGRAKSVKVTKETTTIVGGAGSKDAIDERIAQIKAEIDNTTSDFDR EKLQERLAKLAGGVAVIKVGAATEVELKEIKHRIEDALQATRAAVEEGIVAGGGVSFLAA SSVLDSVQTSDADEKIGVEIIRKALEAPVRTIANNAGFEGSVVVEKIKALPAGQGLDSAT GQYGDMIEMGVLDPVKVTRTTLQNAASVASLILITEATVSEMPKDTTIEESISRAAAQGG QGGMY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCTTGCTTGCACAGGTTATTGTTAACGAGGGTCTTCGTAATGTTGCAGCTGGTGCA AATCCAATTGCAATTCGCCGCGGCATCGACAAGGCTGTTGAGGCTGTTGTCTCCCAGATG AAGGGTATTGCTAAGGAGGTCTCAACCAAGCAGCAGATTGCTTCCGTTGGTACCATTTCT GCAGGTGACCCTGTCATTGGTGGCAAGATTTCAGATGCTATGGACGTTGTCGGCAAGGAT GGCGTCATTACTGTTGAGGAGTCTCAGACCTTTGGTATTGACATCGACACCGTTGAGGGT ATGCAGTTTGACAAGGGCTATGTTTCCCCTTACTTCGCAACCAACAACGAGACTCTCACC GCTGAGCTGGACAATCCTTACATTCTGATGACCGATAGCAAGATCTCCTCCATCCAGGAC ATCCTGCCTATCCTTGAGGCTGTCCAGAAGCAGGGCGCACCTCTGCTCATCATGGCTGAG GACGTTGACGGCGAGGCTTTGACCACCCTCATCCTTAACAAGCTTCGTGGCGTTCTGAAC GTCTGCGCAATT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATLLAQVIVNEGLRNVAAGANPIAIRRGIDKAVEAVVSQMKGIAKEVSTKQQIASVGTIS AGDPVIGGKISDAMDVVGKDGVITVEESQTFGIDIDTVEGMQFDKGYVSPYFATNNETLT AELDNPYILMTDSKISSIQDILPILEAVQKQGAPLLIMAEDVDGEALTTLILNKLRGVLN VCAI |