RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b8487 |
| Chaperonin Group: | I |
| Deposit Date: | 2006-03-13 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Halothermothrix |
| Species: | orenii |
| Strain: | H168 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Clostridia; Halanaerobiales; Halanaerobiaceae; Halothermothrix |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_011899 |
| Peptide Genbank Accession: | YP_002507958 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | From complete genome sequence. Type strain synonyms H168 = DSM 9562 = OCM 544. This organism is a member of a group of anaerobic halophilic bacteria related to the Clostridia. Originally isolated from salted lake sediment. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGAATTAAAATTTAGTGAAGATGCTCGCCGTGCTCTGGAACGCGGTGTTGAT ACTCTGGCAAATGCTGTTAAAGTAACTTTAGGTCCAAAAGGACGAAATGTAGTTCTTGAA AAGAGCTTTGGAGCTCCTACTATCACCAACGATGGTGTTAGTATTGCCCGTGAAATAGAA CTTGAAAATCACTACGAAAACATGGGGGCTCAGACTGTAAAAGAGGTTGCTACCAAAACC AATGATGTTGCCGGTGATGGTACAACCACTGCTACAGTACTGGCTCAGGCTATTTTCAAG GAAGGTTTAAAGAATGTGGCCGCCGGTGCCAACCCCATGATCCTGAAAAGGGGTATTGAA AAGGCCGTTCAGAAGCTGGTAGAAGAGATTAAGGAACTAAGCAAACCTGTTGAAGGAAAA GAAGCAGTTTCCCAGGTTGCTGCTATTTCTGCCGGTAATGATGAAGAAGTCGGTAAGCTT ATTGCTGAAGCTATGGAGAAAGTTGGTCAGGATGGAGTTATCTCTGTTGAAGAATCCAAG AGTATGGGGACTTCTTTAGATGTAGTTGAAGGTATGCAGTTCGATAGAGGATATCTCTCC CCCTATATGGTAACCGATACTGATGCTATGGAAGCTTCCCTTGAAGATCCCTATATCCTG ATCACTGACAAGAAGATATCTAATATCCAGGAAATCTTACCCCTGTTAGAAAAAGTAGCC CAGAGTGGTAAACCTCTCTTAATAATTGCTGAAGATGTTGAAGGGGAAGCCCTGGCTACT CTTGTTGTCAACAAGATTCGTGGTACCTTTAACTGTGTTGCTGTTAAAGCACCTGGCTTT GGTGATCGTCGTAAGGCTATGTTAGAAGACATTGCTATTCTGACCGGTGGTCAGGTAATC ACTGAAGACCTGGGTCTCAAGCTCGAAAATGCTGATATTAGTATGCTTGGTCGGGCCCAC AAAGTAACAGTAACCAAAGAGGATACTACTATTGTAGAAGGTGCTGGAGATAGCAAAGAA ATTCAGAATAGAATTAAGCAGATCAGGACTCAAATTGAAAATACTGATTCTGATTTTGAC AGGGAAAAACTGCAGGAAAGACTGGCTAAACTGGCCGGTGGTGTGGCTGTAATTAAGGTT GGTGCTGCTACTGAAACTGAATTAAAAGAAAAGAAACACCGTATTGAAGATGCTCTCTCT GCTACCAGGGCCGCTGTAGAAGAAGGACTGGTAGCCGGTGGTGGAACCACCCTTATTGAT GCCATTCCTGCCCTTGATGAACTGAACCTTGAAGGTGACGAAGCTACCGGTGTTGACATT GTTAGAAAAGCACTTGAAGCCCCGGTACGTCTCATAGCAGACAATGCCGGTTATGAAGGT TCAGTAATTGTTGAGAAGGTTAAGTCTGAAGATAAAGGTATCGGTTTCGATGCCTATAAC GGTGAGTTTGTAAATATGATTGAATCCGGTATTGTAGACCCGGCTAAGGTAACCCGTTCT GCCCTTCAGAATGCTGCCAGTGCTGCTGCTATGTTGCTGACTACTGAATGCCTGGTGGCT GATAAAGAAGAGGATAATGACAGTAATGGTAATGCCGGAATGCCCGGTGGCGGTATGCCC GGCGGAATGGGTGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKELKFSEDARRALERGVDTLANAVKVTLGPKGRNVVLEKSFGAPTITNDGVSIAREIE LENHYENMGAQTVKEVATKTNDVAGDGTTTATVLAQAIFKEGLKNVAAGANPMILKRGIE KAVQKLVEEIKELSKPVEGKEAVSQVAAISAGNDEEVGKLIAEAMEKVGQDGVISVEESK SMGTSLDVVEGMQFDRGYLSPYMVTDTDAMEASLEDPYILITDKKISNIQEILPLLEKVA QSGKPLLIIAEDVEGEALATLVVNKIRGTFNCVAVKAPGFGDRRKAMLEDIAILTGGQVI TEDLGLKLENADISMLGRAHKVTVTKEDTTIVEGAGDSKEIQNRIKQIRTQIENTDSDFD REKLQERLAKLAGGVAVIKVGAATETELKEKKHRIEDALSATRAAVEEGLVAGGGTTLID AIPALDELNLEGDEATGVDIVRKALEAPVRLIADNAGYEGSVIVEKVKSEDKGIGFDAYN GEFVNMIESGIVDPAKVTRSALQNAASAAAMLLTTECLVADKEEDNDSNGNAGMPGGGMP GGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACAGTACTGGCTCAGGCTATTTTCAAGGAAGGTTTAAAGAATGTGGCCGCCGGTGCC AACCCCATGATCCTGAAAAGGGGTATTGAAAAGGCCGTTCAGAAGCTGGTAGAAGAGATT AAGGAACTAAGCAAACCTGTTGAAGGAAAAGAAGCAGTTTCCCAGGTTGCTGCTATTTCT GCCGGTAATGATGAAGAAGTCGGTAAGCTTATTGCTGAAGCTATGGAGAAAGTTGGTCAG GATGGAGTTATCTCTGTTGAAGAATCCAAGAGTATGGGGACTTCTTTAGATGTAGTTGAA GGTATGCAGTTCGATAGAGGATATCTCTCCCCCTATATGGTAACCGATACTGATGCTATG GAAGCTTCCCTTGAAGATCCCTATATCCTGATCACTGACAAGAAGATATCTAATATCCAG GAAATCTTACCCCTGTTAGAAAAAGTAGCCCAGAGTGGTAAACCTCTCTTAATAATTGCT GAAGATGTTGAAGGGGAAGCCCTGGCTACTCTTGTTGTCAACAAGATTCGTGGTACCTTT AACTGTGTTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIFKEGLKNVAAGANPMILKRGIEKAVQKLVEEIKELSKPVEGKEAVSQVAAIS AGNDEEVGKLIAEAMEKVGQDGVISVEESKSMGTSLDVVEGMQFDRGYLSPYMVTDTDAM EASLEDPYILITDKKISNIQEILPLLEKVAQSGKPLLIIAEDVEGEALATLVVNKIRGTF NCVAV |