RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b11940 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-03-30 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Leptothrix |
| Species: | cholodnii |
| Strain: | SP-6 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; unclassified Burkholderiales; Burkholderiales Genera incertae sedis; Leptothrix |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | NC_010524 |
| Peptide Genbank Accession: | YP_001789523 |
| Best FASTA Match: | b29975 Pelomonas puraquae CCUG 52769 (see fasta results) |
| Date of FASTA search: | 2024-07-01 |
| FASTA identity %: | 93.500 |
| Best BLASTP Match: | b30177 Albidiferax sp. OV413 (see blastp results) |
| Date of BLASTP search: | 2024-07-01 |
| BLASTP identity %: | 96.757 |
| Source: | Genbank |
| Notes: | Isolated from water and flocculent from an artificial iron seep in Ithaca, NY. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCAAAAGACGTGATCTTTGGCGGCGAGGCACGTGCCCGCATGGTCGAAGGCGTG AACATCCTGGCCAACGCGGTCAAGGTCACCCTGGGCCCCAAGGGTCGCAACGTGGTGCTC GAGCGCTCGTTCGGCGCCCCGACCGTGACCAAGGACGGTGTGTCCGTGGCCAAGGAAATC GAGCTCAAGGACAAGCTGCAGAACATGGGCGCGCAGATGGTCAAGGAAGTTGCTTCCAAG ACCAGCGACAACGCCGGTGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCATCGTG CGCGAAGGCATGAAGTACGTGGCCGCCGGCATGAACCCGATGGATCTGAAGCGCGGCATC GACAAGGCGGTGCACGCCCTGGTCGCCGAGCTGAAGAAGGCTTCGAAGGCCACCACGACG TCGAAGGAAATCGCCCAGGTTGGCTCGATCTCGGCCAACAGCGACGAATCGATCGGCACC ATCATCGCCAACGCGATGGACAAGGTCGGCAAGGAAGGCGTCATCACCGTCGAAGACGGC AAGTCGCTGGACAACGAGCTCGACGTCGTCGAAGGCATGCAGTTCGACCGCGGCTACCTG TCGCCGTACTTCATCAACAACCCCGAGAAGCAAGCCGCGCTGCTGGACAACCCGTTCGTC CTGCTGTTCGACAAGAAGATCTCGAACATCCGCGACCTGCTGCCCACGCTGGAGCAGGTG GCCAAGGCCGGCCGTCCGCTGCTGATCATTGCTGAAGAAGTCGACGGCGAAGCGCTGGCG ACCCTGGTGGTCAACACCATCCGCGGCATCCTGAAGGTCGTGGCCGTCAAGGCGCCTGGC TTCGGCGACCGCCGCAAGGCCATGCTCGAAGACATCGCCATCCTGACCGGCGGCAAGGTC ATCGCCGAAGAAGTCGGCCTGACGCTCGAGAAGGTCACGCTGGCCGATCTGGGCCAGGCC AAGCGCGTCGAAGTGGGCAAGGAAAACACCACCATCATCGACGGCGCCGGTGCCGCTGGC GACATCGAAGCCCGCGTCAAGCAGATCCGCATCCAGATCGAAGAAGCCACCAGCGACTAC GACCGTGAAAAGCTGCAAGAGCGCGTGGCCAAGCTGGCCGGCGGTGTTGCACTGATCAAG GTCGGCGCGGCCACCGAAGTCGAGATGAAGGAAAAGAAGGCCCGTGTCGAAGACGCCCTG CACGCAACCCGCGCAGCCGTCGAAGAAGGCATCGTGGCTGGCGGCGGCGTGGCTCTGCTG CGTGCCAAGCAGGCTGCTGGCGAGATCAAGGGCGACAACGCCGACCAGGACGCCGGCATC AAGCTGGTCCTGAAGGCGATCGAAGCCCCGCTGCGCGAAATCGTCTACAACGCCGGCGGC GAAGCCTCCGTCGTCGTGAACGCCGTGCTGGCCGGTTCGGGCAACTACGGCTTCAACGCC GCCAACGACACCTATGGCGACATGATCGAAATGGGCATCCTGGACCCGACCAAGGTGACC CGCACCGCGCTGCAGAACGCCGCGTCGGTCGCATCGCTGATGCTGACCACCGAGTGCATG GTTGCCGAGGCTCCGAAGGATGAAGCCGCCGGCGGCGGCATGCCCGGCGGCATGGGTGGC ATGGGCGGCATGGGCGGCATGGACATGTGA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVIFGGEARARMVEGVNILANAVKVTLGPKGRNVVLERSFGAPTVTKDGVSVAKEI ELKDKLQNMGAQMVKEVASKTSDNAGDGTTTATVLAQAIVREGMKYVAAGMNPMDLKRGI DKAVHALVAELKKASKATTTSKEIAQVGSISANSDESIGTIIANAMDKVGKEGVITVEDG KSLDNELDVVEGMQFDRGYLSPYFINNPEKQAALLDNPFVLLFDKKISNIRDLLPTLEQV AKAGRPLLIIAEEVDGEALATLVVNTIRGILKVVAVKAPGFGDRRKAMLEDIAILTGGKV IAEEVGLTLEKVTLADLGQAKRVEVGKENTTIIDGAGAAGDIEARVKQIRIQIEEATSDY DREKLQERVAKLAGGVALIKVGAATEVEMKEKKARVEDALHATRAAVEEGIVAGGGVALL RAKQAAGEIKGDNADQDAGIKLVLKAIEAPLREIVYNAGGEASVVVNAVLAGSGNYGFNA ANDTYGDMIEMGILDPTKVTRTALQNAASVASLMLTTECMVAEAPKDEAAGGGMPGGMGG MGGMGGMDM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCCAGGCCATCGTGCGCGAAGGCATGAAGTACGTGGCCGCCGGCATG AACCCGATGGATCTGAAGCGCGGCATCGACAAGGCGGTGCACGCCCTGGTCGCCGAGCTG AAGAAGGCTTCGAAGGCCACCACGACGTCGAAGGAAATCGCCCAGGTTGGCTCGATCTCG GCCAACAGCGACGAATCGATCGGCACCATCATCGCCAACGCGATGGACAAGGTCGGCAAG GAAGGCGTCATCACCGTCGAAGACGGCAAGTCGCTGGACAACGAGCTCGACGTCGTCGAA GGCATGCAGTTCGACCGCGGCTACCTGTCGCCGTACTTCATCAACAACCCCGAGAAGCAA GCCGCGCTGCTGGACAACCCGTTCGTCCTGCTGTTCGACAAGAAGATCTCGAACATCCGC GACCTGCTGCCCACGCTGGAGCAGGTGGCCAAGGCCGGCCGTCCGCTGCTGATCATTGCT GAAGAAGTCGACGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGCGGCATCCTG AAGGTCGTGGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGMKYVAAGMNPMDLKRGIDKAVHALVAELKKASKATTTSKEIAQVGSIS ANSDESIGTIIANAMDKVGKEGVITVEDGKSLDNELDVVEGMQFDRGYLSPYFINNPEKQ AALLDNPFVLLFDKKISNIRDLLPTLEQVAKAGRPLLIIAEEVDGEALATLVVNTIRGIL KVVAV |