RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b15925 |
| Chaperonin Group: | I |
| Deposit Date: | 2010-01-11 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Citrobacter |
| Species: | rodentium |
| Strain: | ICC168 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | FN543502 |
| Peptide Genbank Accession: | CBG89926 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Citrobacter rodentium ICC168 is a wild-type strain shown to cause colonic epithelial cell hyperplasia in mice |
|
Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGTGGCGTT AACGTACTGGCAGATGCAGTAAAAGTAACCCTCGGTCCGAAAGGCCGTAACGTAGTGCTG GACAAATCCTTCGGCGCACCGACCATCACCAAAGATGGCGTTTCCGTAGCGCGTGAAATC GAACTGGAAGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAAGAAGTTGCCTCTAAA GCAAACGATGCGGCAGGCGACGGCACCACCACCGCAACCGTACTGGCTCAGGCGATCATC ACTGAAGGTCTGAAAGCCGTTGCTGCGGGCATGAACCCGATGGATCTGAAACGTGGTATC GATAAAGCGGTTACTGCTGCGGTTGAAGAACTGAAAGCGCTGTCCGTACCGTGCTCTGAC TCGAAAGCGATTGCTCAGGTAGGCACCATCTCCGCTAACTCCGACGAAACCGTAGGTAAA CTGATCGCTGAAGCGATGGATAAAGTCGGTAAAGAAGGCGTGATCACCGTTGAAGACGGC ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGCGGCTACCTG TCTCCGTACTTCATCAACAAGCCGGAAACTGGCGCTGTAGAACTGGAAAGCCCGTACATC CTGCTGGCTGACAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTGGAAGCCGTT GCGAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGACGTGGAAGGCGAAGCGCTGGCG ACGCTGGTGGTTAACACCATGCGCGGCATCGTGAAAGTGGCTGCGGTTAAAGCGCCGGGC TTCGGCGATCGTCGTAAAGCCATGCTGCAGGATATCGCTACCCTGACCGCCGGTACCGTT ATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCGACCCTGGAAGATCTGGGTCAGGCG AAACGCGTGGTGATCAACAAAGACACCACTACCATCATCGATGGCGTGGGCGAAGAAGCG GCAATTCAGGGTCGTGTGACTCAGATTCGTCAGCAGATCGAAGAAGCCACTTCCGACTAC GATCGTGAAAAATTGCAGGAGCGCGTAGCGAAACTGGCAGGCGGCGTTGCGGTAATCAAA GTTGGCGCAGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGACGCCCTG CACGCGACCCGTGCGGCGGTGGAAGAAGGCGTGGTTGCCGGCGGCGGCGTTGCGCTGATT CGCGCAGCATCGAAGATTGCCGATCTGAAAGGTCAGAACGAAGATCAGAACGTGGGTATC AAAGTCGCGCTGCGCGCGATGGAAGCGCCGCTGCGTCAGATCGTGCTGAACTGCGGCGAA GAACCGTCTGTTGTGGCGAACACCGTGAAAGGCGGCGACGGCAACTACGGTTACAATGCG GCGACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGACCCGACCAAAGTAACC CGTTCTGCACTGCAGTACGCGGCTTCTGTGGCTGGCCTGATGATCACCACCGAGTGCATG GTGACCGACCTGCCGAAAGGCGATGCGCCTGACTTAGGTGCTGCTGGTGGTATGGGCGGC ATGGGTGGTATGGGCGGCATGATGTAG |
|
Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPYILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTAGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVTQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RAASKIADLKGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKGDAPDLGAAGGMGG MGGMGGMM |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCTCAGGCGATCATCACTGAAGGTCTGAAAGCCGTTGCTGCGGGCATG AACCCGATGGATCTGAAACGTGGTATCGATAAAGCGGTTACTGCTGCGGTTGAAGAACTG AAAGCGCTGTCCGTACCGTGCTCTGACTCGAAAGCGATTGCTCAGGTAGGCACCATCTCC GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGATAAAGTCGGTAAA GAAGGCGTGATCACCGTTGAAGACGGCACCGGTCTGCAGGACGAACTGGACGTGGTTGAA GGTATGCAGTTCGACCGCGGCTACCTGTCTCCGTACTTCATCAACAAGCCGGAAACTGGC GCTGTAGAACTGGAAAGCCCGTACATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGC GAAATGCTGCCGGTTCTGGAAGCCGTTGCGAAAGCAGGCAAACCGCTGCTGATCATCGCT GAAGACGTGGAAGGCGAAGCGCTGGCGACGCTGGTGGTTAACACCATGCGCGGCATCGTG AAAGTGGCTGCGGTT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTIS ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPYILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |