RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12724 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-12-02 |
| Type: | cli |
| Type strain?: | no |
| Genus: | Escherichia |
| Species: | coli |
| Strain: | 0127:H6 E2348/69 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | FM180568 |
| Peptide Genbank Accession: | CAS12017 |
| Best FASTA Match: | b20318 Escherichia coli DEC2D (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | b35292 Shigella boydii 59-248 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | This is an enteropathogenic E. coli (EPEC) strain. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGACGTAAAATTCGGTAACGACGCTCGTGTGAAAATGCTGCGCGGCGTA AACGTACTGGCAGATGCAGTGAAAGTTACCCTCGGTCCGAAAGGCCGTAACGTAGTTCTG GATAAATCTTTCGGTGCACCGACCATCACCAAAGATGGTGTTTCCGTTGCTCGTGAAATC GAACTGGAAGACAAGTTCGAAAACATGGGTGCGCAGATGGTGAAAGAAGTTGCCTCTAAA GCGAATGACGCTGCAGGCGACGGTACCACCACTGCAACCGTACTGGCTCAGGCTATCATC ACTGAGGGTCTGAAAGCTGTTGCTGCGGGCATGAACCCGATGGACCTGAAACGTGGTATC GACAAAGCAGTTACCGCTGCAGTTGAAGAACTGAAAGCGCTGTCCGTACCGTGCTCTGAC TCTAAAGCGATTGCTCAGGTTGGTACCATCTCTGCTAACTCCGACGAAACCGTAGGTAAA CTGATCGCTGAAGCGATGGACAAAGTCGGTAAAGAAGGCGTTATCACCGTTGAAGACGGT ACCGGTCTGCAGGACGAACTGGACGTGGTTGAAGGTATGCAGTTCGACCGTGGCTACCTG TCTCCTTACTTCATCAACAAGCCGGAAACTGGCGCAGTAGAACTGGAAAGCCCGTTCATC CTGCTGGCTGACAAGAAAATCTCCAACATCCGCGAAATGCTGCCGGTTCTCGAAGCTGTT GCCAAAGCAGGCAAACCGCTGCTGATCATCGCTGAAGATGTTGAAGGCGAAGCGCTGGCA ACTCTGGTTGTTAACACCATGCGTGGCATCGTGAAAGTTGCTGCGGTTAAAGCTCCGGGC TTCGGCGATCGTCGTAAAGCTATGCTGCAGGATATCGCAACCCTGACTGGCGGTACCGTA ATCTCTGAAGAGATCGGTATGGAGCTGGAAAAAGCAACCCTGGAAGACCTGGGTCAGGCT AAACGTGTTGTGATCAACAAAGACACCACCACCATCATCGATGGCGTGGGTGAAGAAGCT GCAATCCAGGGCCGTGTTGCTCAGATCCGTCAGCAGATTGAAGAAGCAACTTCTGACTAC GACCGTGAAAAACTGCAGGAGCGCGTAGCGAAACTGGCAGGCGGCGTTGCAGTTATCAAA GTTGGTGCTGCTACCGAAGTTGAAATGAAAGAGAAAAAAGCACGCGTTGAAGACGCCCTG CACGCGACCCGTGCTGCGGTAGAAGAAGGCGTGGTTGCTGGTGGTGGTGTTGCGCTGATC CGCGTAGCGTCTAAACTGGCTGACCTGCGTGGTCAGAACGAAGACCAGAACGTGGGTATC AAAGTTGCACTGCGTGCAATGGAAGCTCCGCTGCGTCAGATCGTCCTGAACTGCGGCGAA GAACCGTCTGTTGTTGCTAACACCGTTAAAGGCGGCGACGGCAACTACGGTTACAACGCA GCAACCGAAGAATACGGCAACATGATCGACATGGGTATCCTGGATCCAACTAAAGTAACC CGTTCTGCTCTGCAGTACGCGGCTTCTGTGGCTGGCCTGATGATCACCACCGAGTGCATG GTTACCGACCTGCCGAAAAACGATGCAGCTGACTTAGGCGCTGCTGGCGGTATGGGCGGC ATGGGTGGCATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARVKMLRGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFENMGAQMVKEVASKANDAAGDGTTTATVLAQAIITEGLKAVAAGMNPMDLKRGI DKAVTAAVEELKALSVPCSDSKAIAQVGTISANSDETVGKLIAEAMDKVGKEGVITVEDG TGLQDELDVVEGMQFDRGYLSPYFINKPETGAVELESPFILLADKKISNIREMLPVLEAV AKAGKPLLIIAEDVEGEALATLVVNTMRGIVKVAAVKAPGFGDRRKAMLQDIATLTGGTV ISEEIGMELEKATLEDLGQAKRVVINKDTTTIIDGVGEEAAIQGRVAQIRQQIEEATSDY DREKLQERVAKLAGGVAVIKVGAATEVEMKEKKARVEDALHATRAAVEEGVVAGGGVALI RVASKLADLRGQNEDQNVGIKVALRAMEAPLRQIVLNCGEEPSVVANTVKGGDGNYGYNA ATEEYGNMIDMGILDPTKVTRSALQYAASVAGLMITTECMVTDLPKNDAADLGAAGGMGG MGGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTACTGGCTCAGGCTATCATCACTGAGGGTCTGAAAGCTGTTGCTGCGGGCATG AACCCGATGGACCTGAAACGTGGTATCGACAAAGCAGTTACCGCTGCAGTTGAAGAACTG AAAGCGCTGTCCGTACCGTGCTCTGACTCTAAAGCGATTGCTCAGGTTGGTACCATCTCT GCTAACTCCGACGAAACCGTAGGTAAACTGATCGCTGAAGCGATGGACAAAGTCGGTAAA GAAGGCGTTATCACCGTTGAAGACGGTACCGGTCTGCAGGACGAACTGGACGTGGTTGAA GGTATGCAGTTCGACCGTGGCTACCTGTCTCCTTACTTCATCAACAAGCCGGAAACTGGC GCAGTAGAACTGGAAAGCCCGTTCATCCTGCTGGCTGACAAGAAAATCTCCAACATCCGC GAAATGCTGCCGGTTCTCGAAGCTGTTGCCAAAGCAGGCAAACCGCTGCTGATCATCGCT GAAGATGTTGAAGGCGAAGCGCTGGCAACTCTGGTTGTTAACACCATGCGTGGCATCGTG AAAGTTGCTGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGLKAVAAGMNPMDLKRGIDKAVTAAVEELKALSVPCSDSKAIAQVGTIS ANSDETVGKLIAEAMDKVGKEGVITVEDGTGLQDELDVVEGMQFDRGYLSPYFINKPETG AVELESPFILLADKKISNIREMLPVLEAVAKAGKPLLIIAEDVEGEALATLVVNTMRGIV KVAAV |