RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12593 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-10-05 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Aliivibrio |
| Species: | salmonicida |
| Strain: | LFI1238 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Aliivibrio |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | FM178379 |
| Peptide Genbank Accession: | CAQ77702 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Formerly Vibrio salmonicida. From complete sequence of chromosome 1. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCTAAAGACGTTAAATTTGGTAATGACGCACGAATCAAAATGCTAGAAGGTGTA AATGTTCTGGCTGATGCGGTTAAAGTAACTTTGGGTCCTAAGGGTCGTAACGTTGTTTTA GATAAATCATTTGGCGCACCAACGATCACTAAAGATGGTGTTTCTGTTGCACGTGAAATC GAACTTGAAGATAAGTTCCAAAACATGGGCGCACAAATGGTTAAAGAAGTGGCTTCGCAA GCGAATGACGCGGCGGGCGACGGAACAACAACGGCAACCGTTCTTGCTCAAGCTATCATT GCTGAAGGCCTAAAAGCCGTTGCTGCGGGTATGAACCCAATGGATCTTAAACGTGGTATC GACAAAGCAGTTATTGCTGCTGTTGAAGCACTTAAAGATCTATCTGTTCCATGTGCTGAT ACAAAAGCGATCGCGCAAGTAGGTACTATCTCTGCAAACTCTGATTATACTGTTGGTAAT CTTATTGCTGAAGCAATGGAAAAAGTAGGTCGTGACGGTGTTATCACTGTTGAAGAAGGC CAATCTCTTCAAGACGAATTAGACGTTGTTGAAGGTATGCAGTTTGATCGCGGTTACCTA TCTCCATATTTCGTAAACAACCAAGAAGCCGGTTCTGTTGATCTAGACAGCCCATTCATC TTGCTTGTTGATAAAAAAGTATCAAACATCCGTGAATTGCTTCCAACTCTAGAAGCAGTA GCGAAAGCATCTCGTCCTCTTCTTATCATCGCTGAAGATATTGAAGGCGAAGCGCTTGCT ACTCTAGTTGTGAACAACATGCGTGGTATCGTTAAAGTTGCAGCGGTTAAAGCACCTGGT TTTGGTGACCGTCGTAAAGCAATGTTACAAGATATCGCGGCATTAACTGCGGGCTCTGTA ATTTCAGAAGAGATCGGTTTAGAACTTGAAAAAGTAGTTCTTGAAGATCTTGGTCAAGCG AAGCGTGTAACTATTACAAAAGAAACAACAACTATCATCGATGGTGCTGGTGATGAGACT ATTATCTCTGGCCGTGTTTCTCAAATTCGTCAACAAATCGAAGATGCAACCTCTGACTAC GATAAAGAAAAACTTCAAGAGCGTGTAGCTAAATTGGCTGGCGGTGTTGCAGTGATCAAA GTGGGTGCGGCGACTGAAGTTGAGATGAAAGAGAAGAAAGACCGTGTTGAAGATGCACTT CACGCGACTCGCGCAGCCGTTGAAGAAGGTGTTGTTGCTGGTGGTGGTGTTGCACTTATC CGTGCTGCGTCTAAAGTTGTTAACCTTGAAGGTGACAATGAAGAGCAAACTGTGGGTATT CGTTTAGCACTTCGTGCTATGGAAGCACCACTTCGTCAAATCGTTAAAAACGCAGGTGAA GAAGATTCAGTTGTTGCTAACAACGTTCGCGCTGGTGAAGATAACTACGGTTACAACGCA GCTACTGGCGTTTACGGCGACATGATCGAAATGGGTATTCTTGACCCAACTAAAGTAACG CGTTCTGCACTTCAGTTCGCAGCATCGGTTGCGGGTCTTATGATCACAACAGAAGCGATG ATCACTGATAAGCCACAAGATTCAAGTTCTTCTATGCCAGATATGGGCGGCATGGGCGGC ATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDVKFGNDARIKMLEGVNVLADAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAREI ELEDKFQNMGAQMVKEVASQANDAAGDGTTTATVLAQAIIAEGLKAVAAGMNPMDLKRGI DKAVIAAVEALKDLSVPCADTKAIAQVGTISANSDYTVGNLIAEAMEKVGRDGVITVEEG QSLQDELDVVEGMQFDRGYLSPYFVNNQEAGSVDLDSPFILLVDKKVSNIRELLPTLEAV AKASRPLLIIAEDIEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAALTAGSV ISEEIGLELEKVVLEDLGQAKRVTITKETTTIIDGAGDETIISGRVSQIRQQIEDATSDY DKEKLQERVAKLAGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVAGGGVALI RAASKVVNLEGDNEEQTVGIRLALRAMEAPLRQIVKNAGEEDSVVANNVRAGEDNYGYNA ATGVYGDMIEMGILDPTKVTRSALQFAASVAGLMITTEAMITDKPQDSSSSMPDMGGMGG MGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACCGTTCTTGCTCAAGCTATCATTGCTGAAGGCCTAAAAGCCGTTGCTGCGGGTATG AACCCAATGGATCTTAAACGTGGTATCGACAAAGCAGTTATTGCTGCTGTTGAAGCACTT AAAGATCTATCTGTTCCATGTGCTGATACAAAAGCGATCGCGCAAGTAGGTACTATCTCT GCAAACTCTGATTATACTGTTGGTAATCTTATTGCTGAAGCAATGGAAAAAGTAGGTCGT GACGGTGTTATCACTGTTGAAGAAGGCCAATCTCTTCAAGACGAATTAGACGTTGTTGAA GGTATGCAGTTTGATCGCGGTTACCTATCTCCATATTTCGTAAACAACCAAGAAGCCGGT TCTGTTGATCTAGACAGCCCATTCATCTTGCTTGTTGATAAAAAAGTATCAAACATCCGT GAATTGCTTCCAACTCTAGAAGCAGTAGCGAAAGCATCTCGTCCTCTTCTTATCATCGCT GAAGATATTGAAGGCGAAGCGCTTGCTACTCTAGTTGTGAACAACATGCGTGGTATCGTT AAAGTTGCAGCGGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIIAEGLKAVAAGMNPMDLKRGIDKAVIAAVEALKDLSVPCADTKAIAQVGTIS ANSDYTVGNLIAEAMEKVGRDGVITVEEGQSLQDELDVVEGMQFDRGYLSPYFVNNQEAG SVDLDSPFILLVDKKVSNIRELLPTLEAVAKASRPLLIIAEDIEGEALATLVVNNMRGIV KVAAV |