RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b15977 |
| Chaperonin Group: | I |
| Deposit Date: | 2008-11-30 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Actinobacteria |
| Species: | sp. |
| Strain: | N153 |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Bifidobacteriales; Bifidobacteriaceae |
| Original ID: | N153_103-6 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | FJ577599 |
| Peptide Genbank Accession: | ACV82515 |
| Best FASTA Match: | b26707 Gardnerella vaginalis W11 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 100.000 |
| Best BLASTP Match: | b32847 Gardnerella vaginalis UGent 25.49 LMG 30819 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 100.000 |
| Source: | other |
| Notes: | Vaginal isolate (Nairobi). Sequence represents 2 isolates from vaginal specimens collected as part of a study about HIV resistance in Nairobi commercial sex worker cohort, and a single isolate from Canadian adolescents attending a gynecology clinic, collected preliminary to the Nairobi study. Submitted by J. Schellenberg, University of Manitoba |
| Full Nucleotide Sequence: | - |
| Full Peptide Sequence: | - |
|
Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCGTTTTGGCTCAGTCTTTAGTTCACGAAGGCTTAAAGAATGTTGTTGCAGGAAGC AATCCAATTGCTCTTCGCCGCGGCATTGAAAAAGCTTCCGAAGCAATTGTTAAGGAATTG CTTGCGTCTGCTAAAGATGTTGAAACAAAGGATCAAATCGCTGCTACTGCTACGATTTCT GCTGCCGACCCAGAAGTTGGCGAAAAGATTGCAGAAGCTCTAGATAAGGTTGGTCAAGAC GGCGTTGTTACTGTTGAAGACAACAACAAGTTTGGTCTTGATTTGGACTTTACAGAAGGC ATGCGCTTTGATAAGGGTTACATTTCTCCTTACTTTGTAACTAACGCAGAAGATCAGACT GCTGTTTTGGAAGATCCATACATTTTGCTCACTTCTGGCAAGGTTTCTAGCCAGCAAGAC ATTGTTCATGTTGCAGAACTTGTTATGAAGTCTGGTAAGCCATTGCTTATTATTGCGGAA GATGTTGATGGCGAAGCTTTGCCAACTCTTGTTCTTAACAAGATTCGTGGCACTTTCAAC ACTGTAGCTGTT |
|
Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQSLVHEGLKNVVAGSNPIALRRGIEKASEAIVKELLASAKDVETKDQIAATATIS AADPEVGEKIAEALDKVGQDGVVTVEDNNKFGLDLDFTEGMRFDKGYISPYFVTNAEDQT AVLEDPYILLTSGKVSSQQDIVHVAELVMKSGKPLLIIAEDVDGEALPTLVLNKIRGTFN TVAV |