RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b12844 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-01-18 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Stenotrophomonas |
| Species: | sp. |
| Strain: | SKA14 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Stenotrophomonas |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | DS999412 |
| Peptide Genbank Accession: | EED37061 |
| Best FASTA Match: | b24317 Stenotrophomonas maltophilia SKK35 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 99.100 |
| Best BLASTP Match: | b30315 Stenotrophomonas sp. CC120222-04 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 100.000 |
| Source: | Genbank |
| Notes: | This strain was collected from the Baltic Sea near Skagerrak (57.57N, 10.44E) at a depth of 4 m. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCTGCCAAGGATATTCGTTTCGGTGAAGACGCCCGTTCGCGCATGGTGCGCGGCGTC AACGTTCTCGCCAATGCCGTCAAGGCCACCCTGGGCCCGAAGGGCCGCAACGTCGTGCTG GAAAAGAGCTTCGGCGCTCCGACCATCACCAAGGACGGCGTCTCCGTCGCCAAGGAAATC GAACTGGCTGACAAGTTCGAGAACATGGGCGCGCAGATGGTGAAGGAAGTTGCTTCGCGC ACCAACGACGACGCGGGCGACGGCACCACCACCGCCACCGTGCTGGCCCAGGCCCTGATC CGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATGAACCCGATGGACCTCAAGCGTGGTATC GACAAGGCCGTCGTGGCCGCCGTTGCCGAGCTGAAGAACATCTCCAAGCCGACCGCCGAC GACAAGGCGATCGCCCAGGTCGGTACCATCTCGGCCAACTCGGACGAGTCGATCGGCCAG ATCATCGCTGACGCGATGAAGGAAGTCGGCAAGGAAGGCGTGATCACCGTTGAAGAAGGC TCGGGCCTGGACAACGAGCTGGACGTGGTCAAGGGCATGCAGTTCGACCGCGGCTACCTG TCCCCGTACTTCATCAACAACCAGCAGTCGCAGACCGCTGACCTGGATGACCCGTTCATC CTGCTGCACGACAAGAAGATCTCCAACGTGCGTGACCTGCTGCCGGTGCTGGAAGGCGTC GCCAAGGCCGGCAAGCCGCTGCTGATCGTTGCCGAAGAAGTCGAAGGCGAAGCGCTGGCG ACCCTGGTGGTCAACACCATCCGTGGCATCGTCAAGGTCGTGGCCGTCAAGGCTCCGGGC TTCGGCGACCGTCGCAAGGCGATGCTGGAAGACATGGCCGTGCTGACCGGCGGCACCGTG ATCTCCGAAGAAGTGGGCCTGTCGCTGGAAAAGGCCACCATCAAGGACCTGGGCCGCGCC AAGAAGGTGCAGGTTTCCAAGGAAAACACCACCATCATCGATGGCGTGGGTGACAAGGCT GCCGTCGACGCACGCGTCGGCCAGATCAAGACCCAGATCCAGGACACCTCCTCCGACTAC GATCGCGAGAAGCTGCAGGAACGCGTGGCCAAGCTGGCCGGCGGCGTTGCCGTGATCAAG GTCGGTGCCTCGACCGAAATCGAAATGAAGGAAAAGAAGGATCGCGTCGACGACGCCCTG CACGCCACCCGTGCAGCCGTTGAAGAAGGCGTGGTCCCGGGCGGCGGCGTTGCCCTGGTC CGTGCGGTCACCTCGCTGGCTGGCCTGAAGGGCGCCAACGAAGACCAGAACCACGGCATC CAGATCGCCCTGCGTGCGATGGAAGCCCCGCTGCGCGAAATCGTCGCCAACGCCGGTGAA GAACCGTCGGTCATCATCAACAAGGTCAAGGAAGGCACTGGCAGCTTCGGCTACAACGCC GCCACCGGCGAGTTCGGCGACATGCTGCAGTTCGGCATCCTGGACCCGACCAAGGTGACC CGTTCGGCGCTGCAGAACGCTGCCTCGATCGCTGGCCTGATGATCACCACCGAAGCCATG GTTGCCGAAGCTCCGAAGAAGGACGAGCCGGCCATGGGTGGCGCCGGTGGCATGGGCGGC ATGGGTGGCATGGGCGGCATGGACTTCTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKDIRFGEDARSRMVRGVNVLANAVKATLGPKGRNVVLEKSFGAPTITKDGVSVAKEI ELADKFENMGAQMVKEVASRTNDDAGDGTTTATVLAQALIREGAKAVAAGMNPMDLKRGI DKAVVAAVAELKNISKPTADDKAIAQVGTISANSDESIGQIIADAMKEVGKEGVITVEEG SGLDNELDVVKGMQFDRGYLSPYFINNQQSQTADLDDPFILLHDKKISNVRDLLPVLEGV AKAGKPLLIVAEEVEGEALATLVVNTIRGIVKVVAVKAPGFGDRRKAMLEDMAVLTGGTV ISEEVGLSLEKATIKDLGRAKKVQVSKENTTIIDGVGDKAAVDARVGQIKTQIQDTSSDY DREKLQERVAKLAGGVAVIKVGASTEIEMKEKKDRVDDALHATRAAVEEGVVPGGGVALV RAVTSLAGLKGANEDQNHGIQIALRAMEAPLREIVANAGEEPSVIINKVKEGTGSFGYNA ATGEFGDMLQFGILDPTKVTRSALQNAASIAGLMITTEAMVAEAPKKDEPAMGGAGGMGG MGGMGGMDF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCCACCGTGCTGGCCCAGGCCCTGATCCGCGAAGGTGCCAAGGCTGTTGCCGCCGGCATG AACCCGATGGACCTCAAGCGTGGTATCGACAAGGCCGTCGTGGCCGCCGTTGCCGAGCTG AAGAACATCTCCAAGCCGACCGCCGACGACAAGGCGATCGCCCAGGTCGGTACCATCTCG GCCAACTCGGACGAGTCGATCGGCCAGATCATCGCTGACGCGATGAAGGAAGTCGGCAAG GAAGGCGTGATCACCGTTGAAGAAGGCTCGGGCCTGGACAACGAGCTGGACGTGGTCAAG GGCATGCAGTTCGACCGCGGCTACCTGTCCCCGTACTTCATCAACAACCAGCAGTCGCAG ACCGCTGACCTGGATGACCCGTTCATCCTGCTGCACGACAAGAAGATCTCCAACGTGCGT GACCTGCTGCCGGTGCTGGAAGGCGTCGCCAAGGCCGGCAAGCCGCTGCTGATCGTTGCC GAAGAAGTCGAAGGCGAAGCGCTGGCGACCCTGGTGGTCAACACCATCCGTGGCATCGTC AAGGTCGTGGCCGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQALIREGAKAVAAGMNPMDLKRGIDKAVVAAVAELKNISKPTADDKAIAQVGTIS ANSDESIGQIIADAMKEVGKEGVITVEEGSGLDNELDVVKGMQFDRGYLSPYFINNQQSQ TADLDDPFILLHDKKISNVRDLLPVLEGVAKAGKPLLIVAEEVEGEALATLVVNTIRGIV KVVAV |