RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b19976 |
| Chaperonin Group: | I |
| Deposit Date: | 2011-11-13 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Thermovirga |
| Species: | lienii |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Synergistetes; Synergistia; Synergistales; Synergistaceae; Thermovirga |
| Original ID: | DSM 17291 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP003096 |
| Peptide Genbank Accession: | AER66336 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms Cas60314 = ATCC BAA-1197 = DSM 17291. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGCCAAAGATGCTTGCTTTTAACGAAGAAGCCCGTAGAGCTTTAGAGCGTGGTATTAAC AAAGTTGCAGATACAGTAGGTGTTACCCTTGGTCCAAAGGGTCGCAACGTAGTCCTGGAG AAGAAGTTCGGTTCTCCCACGATAACCAATGACGGTGTAACCATCGCCAAGGAGATAGAG CTTGAGGATCCCTTTGAGAACATGGGAGCTCAGCTGCTCAAGGAAGTTGCTTCTAAGACC AACGATGTCGCTGGTGACGGTACTACGACTGCTACCATTCTCGCTAGGGCAATGATAAAC GAAGGTATGAAGAACGTTGCCGCTGGCGCCAATGGTATGCTCATGCGCAGAGGTATAGAG AAGGCTGTTGACGTCGTGGTCGATGAGCTAAAGAAACTTGCTATTCCCGTCAAGGAAAAA GAGAAGATTGCCCAGGTTGCAGCCATATCCGCTAACGACAAGGCTGTTGGCGAGCTGATC GCCGAGGCCATGGAAAAGGTTGGAGAAGAGGGCGTTATCACTGTAGAGGATAGCCAGACC GTGGGGACCACCCTTGAGGTTGTTGAGGGTCTCCAGTTCGACAAAGGTTATGTGAGCCCA TACATGATGACCGATGCCGAGAGGATGGAGGCAAGCCTCGAGGATGCTTACATCCTTATC CACGATGGTAAGATAAGCAGCGTCAAGGACCTCATTCCTCTCCTTGAGAAGGTTGTACAG ACCGGTAAGCCTCTGTTGATAATCGCTGAGGACATAGAGGGCGAGGCCCTTGCCACCTTG GTGGTCAACAAGCTCCGTGGCGTGATGCAGGTTGTCGCCGTAAAGGCTCCTGGCTTCGGC GAGAGAAGGAAAGCCATGCTCCAGGATATAGCCATAGTGACCGGTGGTCAGGTCATCTCC GAGGATGTGGGCATCAAGCTTGAGAACGCTGATCTATCCATGCTCGGTCGCGCTAAGAAG GTCCGCGTGACCAAGGAAGAGACCACCATCGTAGAGGGTGCCGGTGATCCTGATGCCATA AGGAAGAGGGCTGCCCAGATCAAGGCCGAACTTGAGGAGTCCACTTCCGAGTACGACAAG GAAAAACTTCAGGAGCGCCTTGCCAAGCTTGTCGGTGGCGTGGCTGTGATCCAGGTTGGT GCCGCTACTGAGACTGAGCAGAAGGAGCTCAAGCACAGGATCGAGGACGCTCTCAACGCT ACCCGCGCGGCGGTAGAAGAGGGTATAGTAGCTGGTGGTGGCGTGGCTCTCTTGAATGCC TCCGAGGCTCTGGACAAATTCATTGAGGAGCTCGAGGGCGACGAGAGGACCGGTGCCATG ATAGTGAAGAAAGCTCTTACCGCTCCTGTGTACCTCATCGCCACTAACGCTGGTTATCAG GGCGATGTGGTCATAGAGAAGGTCAAGAGCCTCAAGAAGGGCCACGGCCTCAATGCTGCT ACCGGCGAGTACGAGGACCTCGTGAAGGCCGGTATCATCGACCCAGTGAAGGTCACCCGC AGTGCCCTTCAGAACGCTGGCTCCATCGCGGCCATGGTCTTGACGACCGAAGCCTTGGTC GCCGATAAGCCGAAGAAAGAAAACGAGAACCCCATGCCAGCAGCAGGTATGGACTACTAG |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MPKMLAFNEEARRALERGINKVADTVGVTLGPKGRNVVLEKKFGSPTITNDGVTIAKEIE LEDPFENMGAQLLKEVASKTNDVAGDGTTTATILARAMINEGMKNVAAGANGMLMRRGIE KAVDVVVDELKKLAIPVKEKEKIAQVAAISANDKAVGELIAEAMEKVGEEGVITVEDSQT VGTTLEVVEGLQFDKGYVSPYMMTDAERMEASLEDAYILIHDGKISSVKDLIPLLEKVVQ TGKPLLIIAEDIEGEALATLVVNKLRGVMQVVAVKAPGFGERRKAMLQDIAIVTGGQVIS EDVGIKLENADLSMLGRAKKVRVTKEETTIVEGAGDPDAIRKRAAQIKAELEESTSEYDK EKLQERLAKLVGGVAVIQVGAATETEQKELKHRIEDALNATRAAVEEGIVAGGGVALLNA SEALDKFIEELEGDERTGAMIVKKALTAPVYLIATNAGYQGDVVIEKVKSLKKGHGLNAA TGEYEDLVKAGIIDPVKVTRSALQNAGSIAAMVLTTEALVADKPKKENENPMPAAGMDY |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCTACCATTCTCGCTAGGGCAATGATAAACGAAGGTATGAAGAACGTTGCCGCTGGCGCC AATGGTATGCTCATGCGCAGAGGTATAGAGAAGGCTGTTGACGTCGTGGTCGATGAGCTA AAGAAACTTGCTATTCCCGTCAAGGAAAAAGAGAAGATTGCCCAGGTTGCAGCCATATCC GCTAACGACAAGGCTGTTGGCGAGCTGATCGCCGAGGCCATGGAAAAGGTTGGAGAAGAG GGCGTTATCACTGTAGAGGATAGCCAGACCGTGGGGACCACCCTTGAGGTTGTTGAGGGT CTCCAGTTCGACAAAGGTTATGTGAGCCCATACATGATGACCGATGCCGAGAGGATGGAG GCAAGCCTCGAGGATGCTTACATCCTTATCCACGATGGTAAGATAAGCAGCGTCAAGGAC CTCATTCCTCTCCTTGAGAAGGTTGTACAGACCGGTAAGCCTCTGTTGATAATCGCTGAG GACATAGAGGGCGAGGCCCTTGCCACCTTGGTGGTCAACAAGCTCCGTGGCGTGATGCAG GTTGTCGCCGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATILARAMINEGMKNVAAGANGMLMRRGIEKAVDVVVDELKKLAIPVKEKEKIAQVAAIS ANDKAVGELIAEAMEKVGEEGVITVEDSQTVGTTLEVVEGLQFDKGYVSPYMMTDAERME ASLEDAYILIHDGKISSVKDLIPLLEKVVQTGKPLLIIAEDIEGEALATLVVNKLRGVMQ VVAV |