RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b18882 |
| Chaperonin Group: | I |
| Deposit Date: | 2011-04-17 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Carnobacterium |
| Species: | sp. |
| Strain: | 17-4 |
| Lineage: | root; cellular organisms; Bacteria; Firmicutes; Bacilli; Lactobacillales; Carnobacteriaceae; Carnobacterium |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002563 |
| Peptide Genbank Accession: | AEB30454 |
| Best FASTA Match: | b28251 Carnobacterium inhibens subsp. gilichinskyi ATCC BAA-2557 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 91.700 |
| Best BLASTP Match: | b28254 Carnobacterium inhibens subsp. gilichinskyi ATCC BAA-2557 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 98.370 |
| Source: | Genbank |
| Notes: | Marine isolate. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGATGAGGTGAAGGAAAAAATGGCAAAAGATATTAAATTTTCTGAAGATGCACGTGCA TCAATGCTACGCGGAGTAGATATTTTAGCAGATATTGTTAAAGTAACATTAGGACCCAAA GGAAGAAATGTTGTTTTAGAAAAATCTTACGGCTCACCACTTATTACAAACGATGGAGTT ACAATCGCAAAAGAAATTGAATTAGAAGATCATTTTGAGAATATGGGAGCACAACTTGTT TCAGAAGTTGCTTCTAAAACAAATGATATTGCTGGAGATGGTACTACAACAGCAACTGTT TTAACTCAAGCTATCGTTCGCGAAGGATTGAAAAATGTAACAGCTGGAGCTAATCCAGTT GGGATTCGCCGCGGAATCGAAATGGCAACAAGAGTTGCTGTAGAAGAATTGCTTGCTATT TCTAAAAAAGTAGACTCAAAAGAATCAATTGCACAAATTGCTGCTATTTCTTCAGGAAGC AATGAAACAGGAGAATTGGTTGCAGAAGCAATGGAACGCGTTGGAACAGATGGCGTTATT ACAATTGAAGAATCTAAAGGAATCGAAACAGAATTAGGTGTAGTTGAAGGAATGCAATTT GATCGTGGTTACCTTTCTCAATACATGGTAACAGATAACGATAAAATGGAAGCAAACTTA GAAAACCCTTATATTTTGATTACCGATAAAAAAATCTCAAATATTCAAGAAGTTCTTCCT TTATTGGAACAAATTTTACAACAAGGACGTCCATTGTTGATCATTGCTGATGATGTTGAT GGAGAAGCTCTTCCAACATTAGTATTGAATAAATTACGTGGAACATTTAATGTTGTAGCA GTTAAAGCTCCAGGATTTGGTGATCGTCGTAAAGCTATGCTTGAAGATATTGCTATCTTA ACTGGCGGAACAGTTATTACTGAAGATTTAGGTCTTGAATTGAAAGATACTGAAATCAGT CAATTAGGACATGCAAGTAAAGTAGTTGTGACGAAAGATGCTACTACAATCGTTGAAGGA GCTGGCTCAAAAGAGTCTATTGAACACCGTGTAGCCTTGCTTAAAGCTCAAGCAGCAGAA ACAACTTCTGAATTTGATAAAGAAAAATTACAAGAACGTCTAGCTAAACTTTCTGGCGGA GTTGCAGTTATCAAAGTTGGAGCTGCTACTGAAACAGAATTGAAAGAACGTAAATTACGT ATTGAAGATGCTTTAAATGCAGCTCGTGCAGCTGTTGAAGAAGGAATCGTTTCTGGTGGT GGAACAGCTTTAATCAATGTTCAACGTAAAGTATCAGAAATTGAAGCAACAGGCGATGAA GCAACAGGTGTGAAAATTGTGATTCGTGCTCTTGAAGAACCTGTTCGTCAAATCGTGACA AATGCCGGTCTTGAAGGATCTGTAATTGTTGAAAAACTAAAAAGCGTAGACTTAGGCGTA GGATACAACGCAGCTACTGATGAATGGGTAGACATGATTGATGCTGGGATCATTGACCCA ACTAAAGTAACTCGTTCGGCTTTGCAAAATGCAGCTAGTGTTGCAGCATTATTGTTAACA ACTGAAGCAGTTGTTGCAAACCAACCAAAACCTGACGCTCCAATGGGCGGAATGGGAATG GATCCTGGAATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MDEVKEKMAKDIKFSEDARASMLRGVDILADIVKVTLGPKGRNVVLEKSYGSPLITNDGV TIAKEIELEDHFENMGAQLVSEVASKTNDIAGDGTTTATVLTQAIVREGLKNVTAGANPV GIRRGIEMATRVAVEELLAISKKVDSKESIAQIAAISSGSNETGELVAEAMERVGTDGVI TIEESKGIETELGVVEGMQFDRGYLSQYMVTDNDKMEANLENPYILITDKKISNIQEVLP LLEQILQQGRPLLIIADDVDGEALPTLVLNKLRGTFNVVAVKAPGFGDRRKAMLEDIAIL TGGTVITEDLGLELKDTEISQLGHASKVVVTKDATTIVEGAGSKESIEHRVALLKAQAAE TTSEFDKEKLQERLAKLSGGVAVIKVGAATETELKERKLRIEDALNAARAAVEEGIVSGG GTALINVQRKVSEIEATGDEATGVKIVIRALEEPVRQIVTNAGLEGSVIVEKLKSVDLGV GYNAATDEWVDMIDAGIIDPTKVTRSALQNAASVAALLLTTEAVVANQPKPDAPMGGMGM DPGMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTTTAACTCAAGCTATCGTTCGCGAAGGATTGAAAAATGTAACAGCTGGAGCT AATCCAGTTGGGATTCGCCGCGGAATCGAAATGGCAACAAGAGTTGCTGTAGAAGAATTG CTTGCTATTTCTAAAAAAGTAGACTCAAAAGAATCAATTGCACAAATTGCTGCTATTTCT TCAGGAAGCAATGAAACAGGAGAATTGGTTGCAGAAGCAATGGAACGCGTTGGAACAGAT GGCGTTATTACAATTGAAGAATCTAAAGGAATCGAAACAGAATTAGGTGTAGTTGAAGGA ATGCAATTTGATCGTGGTTACCTTTCTCAATACATGGTAACAGATAACGATAAAATGGAA GCAAACTTAGAAAACCCTTATATTTTGATTACCGATAAAAAAATCTCAAATATTCAAGAA GTTCTTCCTTTATTGGAACAAATTTTACAACAAGGACGTCCATTGTTGATCATTGCTGAT GATGTTGATGGAGAAGCTCTTCCAACATTAGTATTGAATAAATTACGTGGAACATTTAAT GTTGTAGCAGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLTQAIVREGLKNVTAGANPVGIRRGIEMATRVAVEELLAISKKVDSKESIAQIAAIS SGSNETGELVAEAMERVGTDGVITIEESKGIETELGVVEGMQFDRGYLSQYMVTDNDKME ANLENPYILITDKKISNIQEVLPLLEQILQQGRPLLIIADDVDGEALPTLVLNKLRGTFN VVAV |