RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b18620 |
| Chaperonin Group: | I |
| Deposit Date: | 2011-02-26 |
| Type: | ref |
| Type strain?: | yes |
| Genus: | Weeksella |
| Species: | virosa |
| Strain: | - |
| Lineage: | root; cellular organisms; Bacteria; Bacteroidetes/Chlorobi group; Bacteroidetes; Flavobacteria; Flavobacteriales; Flavobacteriaceae; Weeksella |
| Original ID: | DSM 16922 |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002455 |
| Peptide Genbank Accession: | ADX67281 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Type strain synonyms ATCC 43766 = CCUG 30538 = CIP 103040 = DSM 16922 = IFO (now NBRC) 16016 = JCM 21250 = LMG 12995 = NCTC 11634. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAAAAGATATTAAATTCGACATTGAGTCGAGAGACTTACTAAAAAAAGGAGTTGAT GCATTGGCAAATGCAGTAAAAGTAACCTTAGGACCCAAAGGACGAAATGTGGTTCTAGAG AAATCTTTCGGTGCACCACACGTAACCAAAGATGGTGTTTCAGTTGCAAAAGAAATTGAA TTAGAGGATCCTATAGAAAATTTGGGTGCACAAATGGTAAAAGAAGTAGCCTCTAAGACC AATGATGTTGCTGGTGATGGTACAACTACTGCAACAGTTTTGGCGCAAGCTATCGTACGT GAAGGTTTGAAAAACGTTGCTGCTGGTGCAAACCCAATGGACCTGAAACGCGGAATCGAT AAAGCTGTTTCAACGATTGTAGAAGGTCTAAGAGCACAATCTCAAGAAGTGGGTGATTCA TCAGAAAAAATAAAACAAGTAGCCTCTATCTCTGCAAATAACGACGAAACCATCGGATCG TTGATTGCTGAAGCTTTCTCTAAAGTCGGAAAAGAAGGAGTAATTACAGTAGAAGAAGCA AAAGGTACAGAAACATACGTAGACGTAGTAGAAGGAATGCAATTTGACCGTGGATATCAA TCTCCATACTTCGTCACCAATCCAGACAAAATGATTGCCGAGTTAGAGAATCCTTACATT TTGTTATGTGAGAAAAAAATATCTAACTTACAAGAAATTCTACCGTTATTAGAACCTATC GCCCAATCTGGTCGTCCGTTCTTAATTATTTCTGAAGAGGTAGAAGGACAAGCTTTGGCA ACTTTGGTAGTAAACCGTTTACGTGGATCATTGAAAATTGCTGCAGTAAAAGCACCAGGA TTCGGAGACCGTCGTAAAGCAATGTTAGAGGATATCGCGATCCTAACAGGAGGAACCGTG ATTTCTGAAGAGCAAGGAATTACGCTAGAGTCTGCTACAATGGAAATGTTAGGAACAGCT GAGCGTGTGGTGATTGATAAAGACAATACAACTATTGTAAATGGAGCTGGGAATGCAGAC CAAATCAAGGCCCGTGTTAATCAAATCAAATCACAAATCGAAACCACTACATCAGATTAT GACCGCGAAAAACTACAAGAACGTTTAGCTAAATTGGCCGGAGGAGTTGCCGTGCTTTAC GTTGGAGCAGCTTCTGAAGTAGAAATGAAAGAAATAAAAGACCGTGTAGACGATGCTTTA CATGCTACTCGTGCAGCAGTAGAAGAAGGAATCGTTGCTGGAGGTGGTGTTGCTTTCGTT CGTGCATTAACACATTTAGAAGACCTAAAAGGAGAAAATGCTGACGAAAATACTGGAATC AACATCATCAAACGCGCCATCGAAGAACCTTTACGACAAATCGTACACAATGCAGGAGGT GAAGGATCTGTGGTAGTTGCAAAAGTAAAAGAAGGTACAAACGACTTCGGATACAACGCC AAAACTGATGAATACGTAAACATGATCGAAGCAGGAGTAATCGACCCTACAAAAGTAGCA CGTGTTGCTCTAGAAAATGCAGCTTCTATCGGTGGAATGCTTATCACAACCGAAGCAGTA GTAACAGAAATCAAAAAAGATGAGCCTGCAATGCCACCTATGGGTGGAGGAATGCCAGGG ATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAKDIKFDIESRDLLKKGVDALANAVKVTLGPKGRNVVLEKSFGAPHVTKDGVSVAKEIE LEDPIENLGAQMVKEVASKTNDVAGDGTTTATVLAQAIVREGLKNVAAGANPMDLKRGID KAVSTIVEGLRAQSQEVGDSSEKIKQVASISANNDETIGSLIAEAFSKVGKEGVITVEEA KGTETYVDVVEGMQFDRGYQSPYFVTNPDKMIAELENPYILLCEKKISNLQEILPLLEPI AQSGRPFLIISEEVEGQALATLVVNRLRGSLKIAAVKAPGFGDRRKAMLEDIAILTGGTV ISEEQGITLESATMEMLGTAERVVIDKDNTTIVNGAGNADQIKARVNQIKSQIETTTSDY DREKLQERLAKLAGGVAVLYVGAASEVEMKEIKDRVDDALHATRAAVEEGIVAGGGVAFV RALTHLEDLKGENADENTGINIIKRAIEEPLRQIVHNAGGEGSVVVAKVKEGTNDFGYNA KTDEYVNMIEAGVIDPTKVARVALENAASIGGMLITTEAVVTEIKKDEPAMPPMGGGMPG MM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACAGTTTTGGCGCAAGCTATCGTACGTGAAGGTTTGAAAAACGTTGCTGCTGGTGCA AACCCAATGGACCTGAAACGCGGAATCGATAAAGCTGTTTCAACGATTGTAGAAGGTCTA AGAGCACAATCTCAAGAAGTGGGTGATTCATCAGAAAAAATAAAACAAGTAGCCTCTATC TCTGCAAATAACGACGAAACCATCGGATCGTTGATTGCTGAAGCTTTCTCTAAAGTCGGA AAAGAAGGAGTAATTACAGTAGAAGAAGCAAAAGGTACAGAAACATACGTAGACGTAGTA GAAGGAATGCAATTTGACCGTGGATATCAATCTCCATACTTCGTCACCAATCCAGACAAA ATGATTGCCGAGTTAGAGAATCCTTACATTTTGTTATGTGAGAAAAAAATATCTAACTTA CAAGAAATTCTACCGTTATTAGAACCTATCGCCCAATCTGGTCGTCCGTTCTTAATTATT TCTGAAGAGGTAGAAGGACAAGCTTTGGCAACTTTGGTAGTAAACCGTTTACGTGGATCA TTGAAAATTGCTGCAGTA |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIVREGLKNVAAGANPMDLKRGIDKAVSTIVEGLRAQSQEVGDSSEKIKQVASI SANNDETIGSLIAEAFSKVGKEGVITVEEAKGTETYVDVVEGMQFDRGYQSPYFVTNPDK MIAELENPYILLCEKKISNLQEILPLLEPIAQSGRPFLIISEEVEGQALATLVVNRLRGS LKIAAV |