RECORD DETAILS
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b19048 |
| Chaperonin Group: | I |
| Deposit Date: | 2011-05-23 |
| Type: | ref |
| Type strain?: | no |
| Genus: | Alteromonas |
| Species: | sp. |
| Strain: | SN2 |
| Lineage: | root; cellular organisms; Bacteria; Proteobacteria; Gammaproteobacteria; Alteromonadales; Alteromonadaceae; Alteromonas |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002339 |
| Peptide Genbank Accession: | AEF05693 |
| Best FASTA Match: | - |
| Date of FASTA search: | - |
| FASTA identity %: | - |
| Best BLASTP Match: | - |
| Date of BLASTP search: | - |
| BLASTP identity %: | - |
| Source: | Genbank |
| Notes: | Isolate was obtained from crude oil contaminated sea site and has a capacity to degrade PAH's compounds present in crude oil. |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGGCAGCTAAAGAAGTACGTTTTGGTAACGACGCTCGTACAAAAATGCTTAAAGGCGTA AACACGCTAGCAAACGCAGTGAAAGTTACACTAGGTCCTAAAGGCCGTAACGTAGTACTA GATAAGTCTTTCGGCGCTCCTACCATCACTAAAGATGGTGTATCTGTAGCCAAAGAAATC GAACTTGAAGACAAGTTTGAGAACATGGGCGCGCAGATGGTTAAAGAAGTTGCGTCTAAA GCGAATGACGAAGCGGGTGACGGTACAACTACTGCAACTGTTTTAGCACAAGCTATTATC ACTGAAGGTCACAAGTCTGTTGCTGCAGGCATGAACCCAATGGATCTTAAGCGTGGTATC GACAAAGCAGTTATTGCTGCGGTTGAAGAGCTTAAAGCCCTATCTACTGATTGTGCTGAC AGCAAGTCAATTGCTCAGGTTGGTACTATCTCTGCAAACTCTGATGCAGAAGTTGGCGAC ATCATTGCTCAAGCAATGGAAAAAGTAGGTAAGGAAGGCGTAATTACTGTTGAAGAAGGT CAAGCACTTCAAAACGAACTTGACGTTGTTGAAGGTATGCAGTTCGACCGCGGTTACCTA TCTCCTTACTTCATTAACAACCAAGAGAACGGCACTGTTGAACTAGACAGCCCTTTCATC CTATTGGTTGATAAGAAAATTTCTAACATCCGTGAGTTGCTTCCTACCCTTGAAGGCGTA GCAAAAGCAGGTAAGCCACTGATGATTATTGCTGAAGATGTTGAAGGCGAAGCCTTAGCT ACACTAGTAGTAAACAACATGCGCGGTATTGTTAAAGTTGCTGCTGTTAAAGCACCTGGC TTTGGTGACCGTCGTAAAGCAATGCTTCAAGACATCGCTATTCTTACTGGTGGTACGGTT ATCTCTGAAGAGATTGGTCTAGACCTTGAAAAAGTAGAGCTAGAAGACCTTGGTACCGCT AAGCGCGTAGTTATCAACAAAGACAATACTACTATTGTTGATGGTAACGGCGACGAAGAA GCGATAGAAGGCCGTTGTGCTCAAATTAAAGGTCAAATTGAAGACTCTTCTTCAGACTAC GACAAAGAAAAGCTTCAAGAGCGTTTAGCTAAGCTTTCTGGCGGTGTTGCAGTAATTAAA GTTGGTGCTGCTACCGAAGTAGAAATGAAAGAGAAGAAAGACCGCGTTGAAGATGCACTT CATGCAACTCGCGCCGCGGTTGAAGAAGGCGTAGTACCTGGTGGTGGTGTGGCGCTAGTT CGTGCAGCAGCTAAGCTTGCTAGCCTAACTGGCGAAAACGAAGACCAAACTGTAGGTATT AAGCTTGCACTACGTGCAATGGAAGCGCCTTTACGTCAAATCGCTAGCAACGCCGGTGCA GAAGCATCTGTTGTGGTTAACGAAGTGAAAAATGGCGACGGTAACTACGGTTACAATGCG GGCAACGACACGTACGGCGACATGCTAGAGATGGGTATTCTTGACCCAACTAAAGTAACG CGCTCTGCACTACAGTTCGCAGCATCAATCGCTTCACTTATGATTACAACTGAAGCCATG ATTGCAGATATACCTCAAGACGAAGCAGCGCCTGCAATGCCTGATATGGGCGGCATGGGT GGAATGGGCGGCATGATGTAA |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MAAKEVRFGNDARTKMLKGVNTLANAVKVTLGPKGRNVVLDKSFGAPTITKDGVSVAKEI ELEDKFENMGAQMVKEVASKANDEAGDGTTTATVLAQAIITEGHKSVAAGMNPMDLKRGI DKAVIAAVEELKALSTDCADSKSIAQVGTISANSDAEVGDIIAQAMEKVGKEGVITVEEG QALQNELDVVEGMQFDRGYLSPYFINNQENGTVELDSPFILLVDKKISNIRELLPTLEGV AKAGKPLMIIAEDVEGEALATLVVNNMRGIVKVAAVKAPGFGDRRKAMLQDIAILTGGTV ISEEIGLDLEKVELEDLGTAKRVVINKDNTTIVDGNGDEEAIEGRCAQIKGQIEDSSSDY DKEKLQERLAKLSGGVAVIKVGAATEVEMKEKKDRVEDALHATRAAVEEGVVPGGGVALV RAAAKLASLTGENEDQTVGIKLALRAMEAPLRQIASNAGAEASVVVNEVKNGDGNYGYNA GNDTYGDMLEMGILDPTKVTRSALQFAASIASLMITTEAMIADIPQDEAAPAMPDMGGMG GMGGMM |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCAACTGTTTTAGCACAAGCTATTATCACTGAAGGTCACAAGTCTGTTGCTGCAGGCATG AACCCAATGGATCTTAAGCGTGGTATCGACAAAGCAGTTATTGCTGCGGTTGAAGAGCTT AAAGCCCTATCTACTGATTGTGCTGACAGCAAGTCAATTGCTCAGGTTGGTACTATCTCT GCAAACTCTGATGCAGAAGTTGGCGACATCATTGCTCAAGCAATGGAAAAAGTAGGTAAG GAAGGCGTAATTACTGTTGAAGAAGGTCAAGCACTTCAAAACGAACTTGACGTTGTTGAA GGTATGCAGTTCGACCGCGGTTACCTATCTCCTTACTTCATTAACAACCAAGAGAACGGC ACTGTTGAACTAGACAGCCCTTTCATCCTATTGGTTGATAAGAAAATTTCTAACATCCGT GAGTTGCTTCCTACCCTTGAAGGCGTAGCAAAAGCAGGTAAGCCACTGATGATTATTGCT GAAGATGTTGAAGGCGAAGCCTTAGCTACACTAGTAGTAAACAACATGCGCGGTATTGTT AAAGTTGCTGCTGTT |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAIITEGHKSVAAGMNPMDLKRGIDKAVIAAVEELKALSTDCADSKSIAQVGTIS ANSDAEVGDIIAQAMEKVGKEGVITVEEGQALQNELDVVEGMQFDRGYLSPYFINNQENG TVELDSPFILLVDKKISNIRELLPTLEGVAKAGKPLMIIAEDVEGEALATLVVNNMRGIV KVAAV |