RECORD DETAILS
For pacc CP002299, see also: b15875
Add Record To Cart - Printer-friendly version - Close Window| Chaperonin ID: | b15874 |
| Chaperonin Group: | I |
| Deposit Date: | 2009-12-13 |
| Type: | fie |
| Type strain?: | no |
| Genus: | Frankia |
| Species: | sp. |
| Strain: | EuI1c |
| Lineage: | root; cellular organisms; Bacteria; Actinobacteria; Actinobacteria (class); Actinobacteridae; Actinomycetales; Frankineae; Frankiaceae; Frankia |
| Original ID: | - |
| CUTC ID: | - |
| Nucleotide Genbank Accession: | CP002299 |
| Peptide Genbank Accession: | ADP84150 |
| Best FASTA Match: | b20045 Frankia sp. CN3 (see fasta results) |
| Date of FASTA search: | 2024-07-22 |
| FASTA identity %: | 91.700 |
| Best BLASTP Match: | b20045 Frankia sp. CN3 (see blastp results) |
| Date of BLASTP search: | 2024-07-22 |
| BLASTP identity %: | 91.304 |
| Source: | Genbank |
| Notes: | Frankia sp. EuI1c was isolated from the Autumn olive, Elaeagnus umbellata |
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Full Nucleotide Sequence: BLAST this sequence: cpnDB | |
ATGAGCAAGATCCTCACATTTCGCGAGGACGCGCGCCACGCGCTCGAGCACGGGGTGAAC ACGCTGGCCGACGCGGTCAAGGTGACCATCGGCCCGCGCGGGCGCAACGTCGTCCTCGAC AAGTCCTACGGCGCTCCCACCATCACGAACGACGGCGTGACCATCGCCCGTGAGGTCGAG CTGACCAACCCGCACGAGAACCTTGGCGCCCAGCTCGTCAAGGAGGTCGCGACCAAGACC AACGACGTCGCCGGCGACGGTACGACGACGGCGACGGTCCTGGCGCAGGCCATGGTTCGC CAGGGCCTCAAGGAGGTCACCGCCGGCGCTGCCCCGGTGTCGCTGAAGTACGGCATCGAG GCGGCCGTCGAGGCGGTCTCCCAGGCGCTGCTCGACGCGGCCATCGAGGTCAGCTCGCGG GAGACGATCGCCCAGGTCGCCGCGATCTCCGCCCAGGACACCCAGGTCGGCGAGCTCATC GCCGAGGCGATCGACAAGATCGGCAAGGATGGTGTCATCACCATCGAGGAGAGCCAGACC ATGGGTCTGGAGCTCGAGCTGACCGAGGGGATGCAGTTCGACAAGGGCTACATCTCCCCG TACTTCGTCACCGACCAGGAGCGGATGGAGGCCGTCCTCGAGGACGCCTTCGTGCTGCTG CACCCCGGCAAGATCGGCGCTCTCAACGACCTGCTGCCGGTGCTCGAGCTGGTGGTGCAG GAGCGCAAGCCGCTGCTGATCGTCGCCGAGGACATCGACGGCGAGGCCCTGTCGACCCTG GTCGTCAACGCGATGCGCAAGACCTTCCAGGTCGTCGCGGTCAAGGCGCCCGGCTTCGGT GACCGCCGCAAGGCGATGCTGCAGGACCTCGCCGTGCTCACCGGCGGCCAGGTCATCGCC GAGGAGGTCGGCCTCAAGCTCGACGCGGCCACCCTCGCCGACCTCGGCCGGATTCGCCGG GTCGTCGTCGACAAGGACACCACCACGCTGGTCGACGGCGCAGGCGACCCCGAGTCGGTC TCCGCGCGGGTCAAGCAGATCCGGGCCGAGATCGAGGCCTCCGACTCCGACTGGGACAAG GAGAAGCTGCAGGAGCGGCTGGCGAAGCTCGCCGGCGGCGTCGCGGTCATCCGGGTCGGC GCGGCCACCGAGGTCGAGCTCAAGGAGAAGAAGCACCGTCTGGAGGACGCGGTCTCCGCC ACCAAGGCGGCGATCGACGAGGGTGTGGTCGCCGGCGGCGGCTCCGCGCTCGTGCACGTC GCCAGCGCGCTGGACGGCGACCTGGGCAAGACCGGTGACGAGCGGTCCGGGGTTCGGCTG GTGCGGTCCGCACTGACCGCGCCGCTGTACTGGATCGCCCGCAACGCCGGCCTCGACGGC CCGGTCGTCGTGTCGAAGGTCTCCGAGCAGCCGGTCAACCACGGCTTCAACGCGGCCACC CTGACCTATGGCGACCTGATCGCCGACGGGGTCATCGACCCGGTCAAGGTCACCCGGTCG GCCGTCGCGAACGCCGCGTCGATCACGGCGCTGCTGCTGACCACCGAGGCCCTCGTCGTG GAGAAGCCGGCCGAGGCGGCCCCCGCCGCGGCTGGTCACGGCCACAGCCACGGGCACGGC CACAGCCACGGGCCTGGCTTCTAG |
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Full Peptide Sequence: BLAST this sequence: cpnDB | |
MSKILTFREDARHALEHGVNTLADAVKVTIGPRGRNVVLDKSYGAPTITNDGVTIAREVE LTNPHENLGAQLVKEVATKTNDVAGDGTTTATVLAQAMVRQGLKEVTAGAAPVSLKYGIE AAVEAVSQALLDAAIEVSSRETIAQVAAISAQDTQVGELIAEAIDKIGKDGVITIEESQT MGLELELTEGMQFDKGYISPYFVTDQERMEAVLEDAFVLLHPGKIGALNDLLPVLELVVQ ERKPLLIVAEDIDGEALSTLVVNAMRKTFQVVAVKAPGFGDRRKAMLQDLAVLTGGQVIA EEVGLKLDAATLADLGRIRRVVVDKDTTTLVDGAGDPESVSARVKQIRAEIEASDSDWDK EKLQERLAKLAGGVAVIRVGAATEVELKEKKHRLEDAVSATKAAIDEGVVAGGGSALVHV ASALDGDLGKTGDERSGVRLVRSALTAPLYWIARNAGLDGPVVVSKVSEQPVNHGFNAAT LTYGDLIADGVIDPVKVTRSAVANAASITALLLTTEALVVEKPAEAAPAAAGHGHSHGHG HSHGPGF |
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Nucleotide UT Sequence: BLAST this sequence: cpnDB | |
GCGACGGTCCTGGCGCAGGCCATGGTTCGCCAGGGCCTCAAGGAGGTCACCGCCGGCGCT GCCCCGGTGTCGCTGAAGTACGGCATCGAGGCGGCCGTCGAGGCGGTCTCCCAGGCGCTG CTCGACGCGGCCATCGAGGTCAGCTCGCGGGAGACGATCGCCCAGGTCGCCGCGATCTCC GCCCAGGACACCCAGGTCGGCGAGCTCATCGCCGAGGCGATCGACAAGATCGGCAAGGAT GGTGTCATCACCATCGAGGAGAGCCAGACCATGGGTCTGGAGCTCGAGCTGACCGAGGGG ATGCAGTTCGACAAGGGCTACATCTCCCCGTACTTCGTCACCGACCAGGAGCGGATGGAG GCCGTCCTCGAGGACGCCTTCGTGCTGCTGCACCCCGGCAAGATCGGCGCTCTCAACGAC CTGCTGCCGGTGCTCGAGCTGGTGGTGCAGGAGCGCAAGCCGCTGCTGATCGTCGCCGAG GACATCGACGGCGAGGCCCTGTCGACCCTGGTCGTCAACGCGATGCGCAAGACCTTCCAG GTCGTCGCGGTC |
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Peptide UT Sequence: BLAST this sequence: cpnDB | |
ATVLAQAMVRQGLKEVTAGAAPVSLKYGIEAAVEAVSQALLDAAIEVSSRETIAQVAAIS AQDTQVGELIAEAIDKIGKDGVITIEESQTMGLELELTEGMQFDKGYISPYFVTDQERME AVLEDAFVLLHPGKIGALNDLLPVLELVVQERKPLLIVAEDIDGEALSTLVVNAMRKTFQ VVAV |